RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TNNT1P13805 278 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 ATP5JP18859 108 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 HIBADHP31937 336 aaKnown RBP16.3■□□□□ 0.2
NPHP4-208ENST00000478423 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■■■■□ 26.1
NPHP4-208ENST00000478423 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 MYO1BO43795 1136 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 ZAP70P43403 619 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
NPHP4-208ENST00000478423 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 NAPAP54920 295 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 ERLIN1O75477 346 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 HSPA4P34932 840 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 KIF4BQ2VIQ3 1234 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 RDXP35241 583 aaKnown RBP16.29■□□□□ 0.2
NPHP4-208ENST00000478423 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
NPHP4-208ENST00000478423 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-208ENST00000478423 KIF5CO60282 957 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 N4BP3O15049 544 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 PRDM1O75626 825 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 CALML3P27482 149 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-208ENST00000478423 KDRP35968 1356 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 TYRO3Q06418 890 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
NPHP4-208ENST00000478423 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
NPHP4-208ENST00000478423 ERBB3P21860 1342 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 TET3O43151 1660 aa16.28■□□□□ 0.2
NPHP4-208ENST00000478423 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
NPHP4-208ENST00000478423 RTL9Q8NET4 1388 aa16.27■□□□□ 0.2
NPHP4-208ENST00000478423 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
NPHP4-208ENST00000478423 ZNF830Q96NB3 372 aaPredicted RBP16.27■□□□□ 0.2
NPHP4-208ENST00000478423 UFL1O94874 794 aa16.27■□□□□ 0.19
NPHP4-208ENST00000478423 YEATS4O95619 227 aa16.27■□□□□ 0.19
NPHP4-208ENST00000478423 UBASH3AP57075 661 aa16.27■□□□□ 0.19
NPHP4-208ENST00000478423 STAT6P42226 847 aa16.27■□□□□ 0.19
NPHP4-208ENST00000478423 TRIM47Q96LD4 638 aa16.27■□□□□ 0.19
NPHP4-208ENST00000478423 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 CCDC40Q4G0X9 1142 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 CCDC186Q7Z3E2 898 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 AOPEPQ8N6M6 819 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 TAF4BQ92750 862 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 DHX58Q96C10 678 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-208ENST00000478423 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
NPHP4-208ENST00000478423 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 RRAGBQ5VZM2 374 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 TEX11Q8IYF3 940 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 IBTKQ9P2D0 1353 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-208ENST00000478423 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 ERLIN2O94905 339 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 PPP4R3BQ5MIZ7 849 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 C6orf50Q9HD87 102 aa16.25■□□□□ 0.19
NPHP4-208ENST00000478423 ZNF532Q9HCE3 1301 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 IQCEQ6IPM2 695 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 EYA3Q99504 573 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 USP21Q9UK80 565 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 ADCY10Q96PN6 1610 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 A0A0D9SFI3 127 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 CHMP4BP1P59074 171 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 PDCL2Q8N4E4 241 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 SPATA5Q8NB90 893 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 VEZTQ9HBM0 779 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 OTUD7BQ6GQQ9 843 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 TTC12Q9H892 705 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-208ENST00000478423 EXOC1Q9NV70 894 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 RMND1Q9NWS8 449 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
NPHP4-208ENST00000478423 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 CTSWP56202 376 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■■■ 148.9
NPHP4-208ENST00000478423 KRT2P35908 639 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 MROH5Q6ZUA9 1318 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
NPHP4-208ENST00000478423 LRRC24Q50LG9 513 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 SEC62Q99442 399 aaKnown RBP16.23■□□□□ 0.19
NPHP4-208ENST00000478423 COPRSQ9NQ92 184 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 TNNI2P48788 182 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 DNA2P51530 1060 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 PTH1RQ03431 593 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 TRAF1Q13077 416 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-208ENST00000478423 RBM17Q96I25 401 aaKnown RBP16.23■□□□□ 0.19
NPHP4-208ENST00000478423 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
NPHP4-208ENST00000478423 A2ML1A8K2U0 1454 aa16.23■□□□□ 0.19
NPHP4-208ENST00000478423 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
NPHP4-208ENST00000478423 TMX1Q9H3N1 280 aa16.22■□□□□ 0.19
NPHP4-208ENST00000478423 AATFQ9NY61 560 aaKnown RBP eCLIP16.22■□□□□ 0.191e-7■■■■■ 28.7
NPHP4-208ENST00000478423 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms