RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 RAB11FIP4Q86YS3 637 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 ACSBG1Q96GR2 724 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 TNMDQ9H2S6 317 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 ZNF213O14771 459 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 PRC1O43663 620 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
MINDY3-206ENST00000477891 MCM5P33992 734 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 TYRO3Q06418 890 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 OTUD7BQ6GQQ9 843 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 ZNF512BQ96KM6 892 aaPredicted RBP12.37□□□□□ -0.43
MINDY3-206ENST00000477891 CFAP45Q9UL16 551 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 AKAP11Q9UKA4 1901 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 LRP6O75581 1613 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 RCOR1Q9UKL0 485 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 SLIT2O94813 1529 aa12.37□□□□□ -0.43
MINDY3-206ENST00000477891 FGFR2P21802 821 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
MINDY3-206ENST00000477891 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.43
MINDY3-206ENST00000477891 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 TTC12Q9H892 705 aaPredicted RBP12.36□□□□□ -0.43
MINDY3-206ENST00000477891 GJB4Q9NTQ9 266 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 NUP98P52948 1817 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 KLF18A0A0U1RQI7 1052 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
MINDY3-206ENST00000477891 LUZP1Q86V48 1076 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 NCOA7Q8NI08 942 aa12.36□□□□□ -0.43
MINDY3-206ENST00000477891 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
MINDY3-206ENST00000477891 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
MINDY3-206ENST00000477891 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
MINDY3-206ENST00000477891 DDB1Q16531 1140 aa12.35□□□□□ -0.43
MINDY3-206ENST00000477891 TBC1D10CQ8IV04 446 aa12.35□□□□□ -0.43
MINDY3-206ENST00000477891 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
MINDY3-206ENST00000477891 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
MINDY3-206ENST00000477891 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
MINDY3-206ENST00000477891 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
MINDY3-206ENST00000477891 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 APPP05067 770 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 PDE6AP16499 860 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 ITPK1Q13572 414 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
MINDY3-206ENST00000477891 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 PUM3Q15397 648 aaKnown RBP12.34□□□□□ -0.43
MINDY3-206ENST00000477891 ANO6Q4KMQ2 910 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 LPIN2Q92539 896 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
MINDY3-206ENST00000477891 LOC102724428A0A0B4J2F2 783 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 SIK1P57059 783 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 ZSCAN25Q6NSZ9 544 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
MINDY3-206ENST00000477891 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 KIF3AQ9Y496 699 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
MINDY3-206ENST00000477891 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 SNW1Q13573 536 aaKnown RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 RASGRF1Q13972 1273 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 CCAR1Q8IX12 1150 aaKnown RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 STRBPQ96SI9 672 aaKnown RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 CBX8Q9HC52 389 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 SENP2Q9HC62 589 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 UTP14AQ9BVJ6 771 aaKnown RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 MYH3P11055 1940 aa12.33□□□□□ -0.44
MINDY3-206ENST00000477891 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.44
MINDY3-206ENST00000477891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
MINDY3-206ENST00000477891 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
MINDY3-206ENST00000477891 UQCRFS1P1P0C7P4 283 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 C17orf53Q8N3J3 647 aaPredicted RBP12.32□□□□□ -0.44
MINDY3-206ENST00000477891 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
MINDY3-206ENST00000477891 B4E1Z4 1266 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 KCNQ2O43526 872 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 RXRAP19793 462 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 BCAMP50895 628 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 FBXO18Q8NFZ0 1043 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
MINDY3-206ENST00000477891 ROBO1Q9Y6N7 1651 aa12.31□□□□□ -0.44
MINDY3-206ENST00000477891 ANKRD36CQ5JPF3 1778 aa12.31□□□□□ -0.44
MINDY3-206ENST00000477891 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
MINDY3-206ENST00000477891 TRDNQ13061 729 aa12.31□□□□□ -0.44
MINDY3-206ENST00000477891 MAGEB6Q8N7X4 407 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms