RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NPAS4Q8IUM7 802 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 KLHL23Q8NBE8 558 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 RGS22Q8NE09 1264 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 ASAP3Q8TDY4 903 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 LENG1Q96BZ8 264 aaPredicted RBP7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 OSGEPQ9NPF4 335 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 A0A096LPE4 126 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 A0A1W2PPZ6 126 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 C9orf172C9J069 976 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 FSCN2O14926 492 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 ITPKAP23677 461 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 CHRNA4P43681 627 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 GRM2Q14416 872 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 GRIK4Q16099 956 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 IGF2-ASQ6U949 168 aa7.92□□□□□ -1.14
SMNDC1-205ENST00000477763 TM4SF5O14894 197 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 GIPC1O14908 333 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 LDHBP07195 334 aaKnown RBP7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 SELPP16109 830 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 GRIA4P48058 902 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 GLIS3Q8NEA6 775 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 SOX17Q9H6I2 414 aaPredicted RBP7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 ZFYVE1Q9HBF4 777 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 SEC31BQ9NQW1 1179 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 PPP4R2Q9NY27 417 aa7.91□□□□□ -1.14
SMNDC1-205ENST00000477763 METTL12A8MUP2 240 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 PRPF40AO75400 957 aaKnown RBP7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 IKBKEQ14164 716 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 TXNDC11Q6PKC3 985 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 GALNT11Q8NCW6 608 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 FRMD6Q96NE9 622 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 BCO2Q9BYV7 579 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
SMNDC1-205ENST00000477763 TMEM238LA0A1B0GVL6 79 aa7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 ESRRAP11474 423 aaPredicted RBP7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 XRCC5P13010 732 aaKnown RBP7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 CD68P34810 354 aaPredicted RBP7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 ARL4DP49703 201 aa7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 RPS26P11Q5JNZ5 115 aaPredicted RBP7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 PI16Q6UXB8 463 aa7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 MRPL18Q9H0U6 180 aaKnown RBP7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 WWC3Q9ULE0 1092 aa7.89□□□□□ -1.15
SMNDC1-205ENST00000477763 ITGB7P26010 798 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 CDC25BP30305 580 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 C19orf57Q0VDD7 668 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 ADGRE1Q14246 886 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 SHISA2Q6UWI4 295 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 TMEM130Q8N3G9 435 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 SETDB2Q96T68 719 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 ZNF576Q9H609 170 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 SPG7Q9UQ90 795 aa7.88□□□□□ -1.15
SMNDC1-205ENST00000477763 SOX1O00570 391 aaPredicted RBP7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 PCDH1Q08174 1060 aa7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 FOXD4L6Q3SYB3 417 aaPredicted RBP7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 FOXD4L3Q6VB84 417 aaPredicted RBP7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 FBXO33Q7Z6M2 555 aa7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 KLHDC7BQ96G42 594 aa7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
SMNDC1-205ENST00000477763 B3GALT4O96024 378 aa7.86□□□□□ -1.15
SMNDC1-205ENST00000477763 MBTPS1Q14703 1052 aa7.86□□□□□ -1.15
SMNDC1-205ENST00000477763 NXPE4Q6UWF7 544 aa7.86□□□□□ -1.15
SMNDC1-205ENST00000477763 USP21Q9UK80 565 aa7.86□□□□□ -1.15
SMNDC1-205ENST00000477763 GNA15P30679 374 aa7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 ZNF423Q2M1K9 1284 aa7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 DTHD1Q6ZMT9 781 aa7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 Q8N3U1 123 aa7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 DDX54Q8TDD1 881 aaKnown RBP7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 FOXD4L4Q8WXT5 416 aaPredicted RBP7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 SLC7A3Q8WY07 619 aa7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 OSBPL7Q9BZF2 842 aa7.85□□□□□ -1.15
SMNDC1-205ENST00000477763 ADAM11O75078 769 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 GSTT1P30711 240 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 GATA4P43694 442 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 FCGRTP55899 365 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 TXNRD3Q86VQ6 643 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 ANKRD24Q8TF21 1146 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 C12orf49Q9H741 205 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 KCNK4Q9NYG8 393 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 FAM8A1Q9UBU6 413 aa7.84□□□□□ -1.15
SMNDC1-205ENST00000477763 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 DOC2BQ14184 412 aa7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 HGSNATQ68CP4 663 aa7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 C3orf58Q8NDZ4 430 aa7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 DUSP9Q99956 384 aaKnown RBP7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 AKTIPQ9H8T0 292 aa7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
SMNDC1-205ENST00000477763 DUOXA2Q1HG44 320 aa7.82□□□□□ -1.16
SMNDC1-205ENST00000477763 Q6ZS46 218 aa7.82□□□□□ -1.16
SMNDC1-205ENST00000477763 WFDC12Q8WWY7 111 aa7.82□□□□□ -1.16
SMNDC1-205ENST00000477763 NRSN2Q9GZP1 204 aa7.82□□□□□ -1.16
SMNDC1-205ENST00000477763 DDX3YO15523 660 aaKnown RBP7.81□□□□□ -1.16
SMNDC1-205ENST00000477763 WISP1O95388 367 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms