RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMC4Q7Z404 712 aa9.45□□□□□ -0.9
BRCA1-214ENST00000477152 CHMP4AQ9BY43 222 aa9.45□□□□□ -0.9
BRCA1-214ENST00000477152 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-214ENST00000477152 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
BRCA1-214ENST00000477152 CNTNAP1P78357 1384 aa9.45□□□□□ -0.9
BRCA1-214ENST00000477152 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
BRCA1-214ENST00000477152 EIF2S2P20042 333 aaKnown RBP9.44□□□□□ -0.9
BRCA1-214ENST00000477152 GPTP24298 496 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 HOMEZQ8IX15 550 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 ZNF34Q8IZ26 560 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 GJA3Q9Y6H8 435 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 PASKQ96RG2 1323 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 BBOX1O75936 387 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 ECE1P42892 770 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 CTCFP49711 727 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-214ENST00000477152 MAP2K1Q02750 393 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-214ENST00000477152 WDR43Q15061 677 aaKnown RBP eCLIP9.44□□□□□ -0.9
BRCA1-214ENST00000477152 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 SUSD4Q5VX71 490 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 USP50Q70EL3 339 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-214ENST00000477152 CNTROBQ8N137 903 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 SLC27A5Q9Y2P5 690 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 ZNF541Q9H0D2 1346 aa9.44□□□□□ -0.9
BRCA1-214ENST00000477152 ABL2P42684 1182 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 SLC10A5Q5PT55 438 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 TTLL7Q6ZT98 887 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
BRCA1-214ENST00000477152 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 ABT1Q9ULW3 272 aaKnown RBP9.43□□□□□ -0.9
BRCA1-214ENST00000477152 ANKRD36CQ5JPF3 1778 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 PPIP5K2O43314 1243 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 TNIP1Q15025 636 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
BRCA1-214ENST00000477152 NTSR2O95665 410 aa9.42□□□□□ -0.9
BRCA1-214ENST00000477152 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-214ENST00000477152 CALD1Q05682 793 aaKnown RBP9.42□□□□□ -0.9
BRCA1-214ENST00000477152 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
BRCA1-214ENST00000477152 ABCC12Q96J65 1359 aa9.42□□□□□ -0.9
BRCA1-214ENST00000477152 HOXB7P09629 217 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 MORN1Q5T089 497 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 DPP8Q6V1X1 898 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 SP8Q8IXZ3 490 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 MPNDQ8N594 471 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 THUMPD2Q9BTF0 503 aaKnown RBP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 DDX21Q9NR30 783 aaKnown RBP eCLIP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 ADARB2Q9NS39 739 aaKnown RBP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 ZNRF3Q9ULT6 936 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 TRPM7Q96QT4 1865 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 UBN2Q6ZU65 1347 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 SH3TC1Q8TE82 1336 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 BCL2L13Q9BXK5 485 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 TRMT112Q9UI30 125 aaKnown RBP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 HPS5Q9UPZ3 1129 aa9.41□□□□□ -0.9
BRCA1-214ENST00000477152 MYBBP1AQ9BQG0 1328 aaKnown RBP9.41□□□□□ -0.9
BRCA1-214ENST00000477152 ADAMTSL1Q8N6G6 1762 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
BRCA1-214ENST00000477152 VEGFBP49765 207 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 AIMP1Q12904 312 aaKnown RBP9.4□□□□□ -0.9
BRCA1-214ENST00000477152 TCIRG1Q13488 830 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 MAP1SQ66K74 1059 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-214ENST00000477152 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 OLFM4Q6UX06 510 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 COPS6Q7L5N1 327 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 PRR7Q8TB68 274 aa9.4□□□□□ -0.9
BRCA1-214ENST00000477152 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-214ENST00000477152 SOWAHBA6NEL2 793 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
BRCA1-214ENST00000477152 KMT5BQ4FZB7 885 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 CIAPIN1Q6FI81 312 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-214ENST00000477152 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 HYPKQ9NX55 129 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 LAS1LQ9Y4W2 734 aaKnown RBP9.39□□□□□ -0.91
BRCA1-214ENST00000477152 WDR33Q9C0J8 1336 aaKnown RBP9.39□□□□□ -0.91
BRCA1-214ENST00000477152 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 PPP4CP60510 307 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 GRAPQ13588 217 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 GRAPLQ8TC17 118 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-214ENST00000477152 XAGE3Q8WTP9 111 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 WNT2BQ93097 391 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 EYA3Q99504 573 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 ABCC4O15439 1325 aa9.39□□□□□ -0.91
BRCA1-214ENST00000477152 H7C1D1 291 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 FOXN1O15353 648 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 GPR37L1O60883 481 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 AOC3Q16853 763 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 HDGFL1Q5TGJ6 251 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 NLRP10Q86W26 655 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms