RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 IL1R1P14778 569 aa12.24□□□□□ -0.45
COL8A1-206ENST00000474648 ARID4AP29374 1257 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-206ENST00000474648 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
COL8A1-206ENST00000474648 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
COL8A1-206ENST00000474648 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL8A1-206ENST00000474648 TAOK3Q9H2K8 898 aa12.24□□□□□ -0.45
COL8A1-206ENST00000474648 AOX1Q06278 1338 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 MCAMP43121 646 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 RASSF7Q02833 373 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 AOC3Q16853 763 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 ZNF804AQ7Z570 1209 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 COA1Q9GZY4 146 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 HMG20BQ9P0W2 317 aa12.23□□□□□ -0.45
COL8A1-206ENST00000474648 ERC2O15083 957 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 GLRX3O76003 335 aaKnown RBP12.22□□□□□ -0.45
COL8A1-206ENST00000474648 GSPT1P15170 499 aaKnown RBP12.22□□□□□ -0.45
COL8A1-206ENST00000474648 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
COL8A1-206ENST00000474648 GPR162Q16538 588 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 PI16Q6UXB8 463 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
COL8A1-206ENST00000474648 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 HAUS7Q99871 368 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 KCNQ5Q9NR82 932 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 GNL3LQ9NVN8 582 aaKnown RBP12.22□□□□□ -0.45
COL8A1-206ENST00000474648 IQSEC3Q9UPP2 1182 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-206ENST00000474648 NDUFB9Q9Y6M9 179 aa12.22□□□□□ -0.45
COL8A1-206ENST00000474648 A0A1B0GUL6 1792 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 SEMA3EO15041 775 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 ZAP70P43403 619 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 PODNQ7Z5L7 613 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
COL8A1-206ENST00000474648 DBNDD1Q9H9R9 158 aa12.21□□□□□ -0.45
COL8A1-206ENST00000474648 FAM205AQ6ZU69 1335 aa12.2□□□□□ -0.46
COL8A1-206ENST00000474648 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
COL8A1-206ENST00000474648 ECE2O60344 883 aa12.2□□□□□ -0.46
COL8A1-206ENST00000474648 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
COL8A1-206ENST00000474648 MAP4K4O95819 1239 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-206ENST00000474648 CYP2E1P05181 493 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-206ENST00000474648 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-206ENST00000474648 ANTXR1Q9H6X2 564 aa12.2□□□□□ -0.46
COL8A1-206ENST00000474648 DENND2AQ9ULE3 1009 aa12.2□□□□□ -0.46
COL8A1-206ENST00000474648 COL4A5P29400 1685 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 PDS5AQ29RF7 1337 aaKnown RBP12.19□□□□□ -0.46
COL8A1-206ENST00000474648 G3V3G9 751 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 LMNB1P20700 586 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 PIH1D3Q9NQM4 214 aaKnown RBP12.19□□□□□ -0.46
COL8A1-206ENST00000474648 ZNRF3Q9ULT6 936 aa12.19□□□□□ -0.46
COL8A1-206ENST00000474648 COL1A1P02452 1464 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-206ENST00000474648 GOLGB1Q14789 3259 aaKnown RBP12.18□□□□□ -0.46
COL8A1-206ENST00000474648 GOLIM4O00461 696 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-206ENST00000474648 SDSP20132 328 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 GTF2IP78347 998 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-206ENST00000474648 BMP2KLQ5H9B9 411 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
COL8A1-206ENST00000474648 PAG1Q9NWQ8 432 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 ARFGEF1Q9Y6D6 1849 aa12.18□□□□□ -0.46
COL8A1-206ENST00000474648 ARAP2Q8WZ64 1704 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 SALL1Q9NSC2 1324 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 FZD9O00144 591 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 GRIK5Q16478 980 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 DACT2Q5SW24 774 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 STRIP1Q5VSL9 837 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
COL8A1-206ENST00000474648 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 RAD17O75943 681 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 VIL1P09327 827 aaKnown RBP12.16□□□□□ -0.46
COL8A1-206ENST00000474648 FKBP1AP62942 108 aaKnown RBP12.16□□□□□ -0.46
COL8A1-206ENST00000474648 CXCL9Q07325 125 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 KBTBD3Q8NAB2 608 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 EVI5LQ96CN4 794 aa12.16□□□□□ -0.46
COL8A1-206ENST00000474648 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
COL8A1-206ENST00000474648 PSMD14O00487 310 aa12.15□□□□□ -0.46
COL8A1-206ENST00000474648 CHGBP05060 677 aa12.15□□□□□ -0.46
COL8A1-206ENST00000474648 TTF1Q15361 905 aaPredicted RBP12.15□□□□□ -0.46
COL8A1-206ENST00000474648 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
COL8A1-206ENST00000474648 ZNF384Q8TF68 577 aa12.15□□□□□ -0.46
COL8A1-206ENST00000474648 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms