RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SYAP1Q96A49 352 aaPredicted RBP25.75■■□□□ 1.71
CCM2-206ENST00000474617 ZNF274Q96GC6 653 aaPredicted RBP25.75■■□□□ 1.71
CCM2-206ENST00000474617 ANKRD2Q9GZV1 360 aa25.75■■□□□ 1.71
CCM2-206ENST00000474617 TAF6LQ9Y6J9 622 aa25.75■■□□□ 1.71
CCM2-206ENST00000474617 PDS5AQ29RF7 1337 aaKnown RBP25.74■■□□□ 1.71
CCM2-206ENST00000474617 PFKFB2O60825 505 aa25.74■■□□□ 1.71
CCM2-206ENST00000474617 IDH1O75874 414 aaKnown RBP25.74■■□□□ 1.71
CCM2-206ENST00000474617 EVCP57679 992 aa25.74■■□□□ 1.71
CCM2-206ENST00000474617 FAM196AQ6ZSG2 479 aa25.74■■□□□ 1.71
CCM2-206ENST00000474617 PUS7LQ9H0K6 701 aaKnown RBP25.74■■□□□ 1.71
CCM2-206ENST00000474617 GZF1Q9H116 711 aaPredicted RBP25.74■■□□□ 1.71
CCM2-206ENST00000474617 PIH1D3Q9NQM4 214 aaKnown RBP25.74■■□□□ 1.71
CCM2-206ENST00000474617 CARMIL3Q8ND23 1372 aa25.74■■□□□ 1.71
CCM2-206ENST00000474617 ZNF213O14771 459 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 FGAP02671 866 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 HMGN5P82970 282 aaKnown RBP25.73■■□□□ 1.71
CCM2-206ENST00000474617 RASGRF1Q13972 1273 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 STOX1Q6ZVD7 989 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 HELBQ8NG08 1087 aaPredicted RBP25.73■■□□□ 1.71
CCM2-206ENST00000474617 TCRBV5S4A2TA0A5A2 114 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 RFC4P35249 363 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 ZNF445P59923 1031 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 ST3GAL1Q11201 340 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 CAVIN4Q5BKX8 364 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 LARP1BQ659C4 914 aaKnown RBP25.73■■□□□ 1.71
CCM2-206ENST00000474617 PI16Q6UXB8 463 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 MTMR6Q9Y217 621 aa25.73■■□□□ 1.71
CCM2-206ENST00000474617 ZNF532Q9HCE3 1301 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 LAMA4Q16363 1823 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 MCM5P33992 734 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 RGS22Q8NE09 1264 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 NCOA7Q8NI08 942 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 ARHGEF1Q92888 912 aaKnown RBP25.72■■□□□ 1.71
CCM2-206ENST00000474617 AIDAQ96BJ3 306 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 A0A1B0GUL6 1792 aa25.72■■□□□ 1.71
CCM2-206ENST00000474617 TRDNQ13061 729 aa25.71■■□□□ 1.71
CCM2-206ENST00000474617 RALYLQ86SE5 291 aaKnown RBP25.71■■□□□ 1.71
CCM2-206ENST00000474617 PNPLA7Q6ZV29 1317 aa25.7■■□□□ 1.71
CCM2-206ENST00000474617 RPS8P62241 208 aaKnown RBP25.7■■□□□ 1.7
CCM2-206ENST00000474617 PTF1AQ7RTS3 328 aa25.7■■□□□ 1.7
CCM2-206ENST00000474617 NECAB1Q8N987 351 aa25.7■■□□□ 1.7
CCM2-206ENST00000474617 BRF1Q92994 677 aa25.7■■□□□ 1.7
CCM2-206ENST00000474617 LARP6Q9BRS8 491 aaKnown RBP25.7■■□□□ 1.7
CCM2-206ENST00000474617 C4AP0C0L4 1744 aa25.69■■□□□ 1.7
CCM2-206ENST00000474617 FOXP2O15409 715 aa25.69■■□□□ 1.7
CCM2-206ENST00000474617 DHX16O60231 1041 aaKnown RBP25.69■■□□□ 1.7
CCM2-206ENST00000474617 QTRT2Q9H974 415 aaKnown RBP25.69■■□□□ 1.7
CCM2-206ENST00000474617 DENND2AQ9ULE3 1009 aa25.69■■□□□ 1.7
CCM2-206ENST00000474617 MINPP1Q9UNW1 487 aa25.69■■□□□ 1.7
CCM2-206ENST00000474617 CASZ1Q86V15 1759 aa25.69■■□□□ 1.7
CCM2-206ENST00000474617 SLFNL1Q499Z3 407 aa25.68■■□□□ 1.7
CCM2-206ENST00000474617 SMARCC2Q8TAQ2 1214 aa25.68■■□□□ 1.7
CCM2-206ENST00000474617 STRBPQ96SI9 672 aaKnown RBP25.68■■□□□ 1.7
CCM2-206ENST00000474617 PATL2C9JE40 543 aaKnown RBP25.68■■□□□ 1.7
CCM2-206ENST00000474617 PHF14O94880 888 aa25.68■■□□□ 1.7
CCM2-206ENST00000474617 TCEANC2Q96MN5 208 aa25.68■■□□□ 1.7
CCM2-206ENST00000474617 NACAP1Q9BZK3 213 aa25.68■■□□□ 1.7
CCM2-206ENST00000474617 BICDL1Q6ZP65 573 aa25.67■■□□□ 1.7
CCM2-206ENST00000474617 SRP68Q9UHB9 627 aaKnown RBP25.67■■□□□ 1.7
CCM2-206ENST00000474617 BCAMP50895 628 aa25.66■■□□□ 1.7
CCM2-206ENST00000474617 FOXD4L5Q5VV16 416 aaPredicted RBP25.66■■□□□ 1.7
CCM2-206ENST00000474617 MB21D2Q8IYB1 491 aaPredicted RBP25.66■■□□□ 1.7
CCM2-206ENST00000474617 FOXD4L4Q8WXT5 416 aaPredicted RBP25.66■■□□□ 1.7
CCM2-206ENST00000474617 KCNQ4P56696 695 aa25.65■■□□□ 1.7
CCM2-206ENST00000474617 MAGEB6Q8N7X4 407 aa25.65■■□□□ 1.7
CCM2-206ENST00000474617 MTA3Q9BTC8 594 aa25.65■■□□□ 1.7
CCM2-206ENST00000474617 ZSCAN16Q9H4T2 348 aaPredicted RBP25.65■■□□□ 1.7
CCM2-206ENST00000474617 CNNM2Q9H8M5 875 aa25.65■■□□□ 1.7
CCM2-206ENST00000474617 WWC3Q9ULE0 1092 aa25.65■■□□□ 1.7
CCM2-206ENST00000474617 UBE2HP62256 183 aa25.64■■□□□ 1.7
CCM2-206ENST00000474617 VPS37DQ86XT2 251 aa25.64■■□□□ 1.7
CCM2-206ENST00000474617 GPT2Q8TD30 523 aa25.64■■□□□ 1.7
CCM2-206ENST00000474617 GRPEL1Q9HAV7 217 aa25.64■■□□□ 1.7
CCM2-206ENST00000474617 VPS37CA5D8V6 355 aaPredicted RBP25.63■■□□□ 1.69
CCM2-206ENST00000474617 TTLL5Q6EMB2 1281 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 CAVIN1Q6NZI2 390 aaKnown RBP25.63■■□□□ 1.69
CCM2-206ENST00000474617 KRT27Q7Z3Y8 459 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 FAM184AQ8NB25 1140 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 LRP2BPQ9P2M1 347 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 LETM1O95202 739 aaPredicted RBP25.63■■□□□ 1.69
CCM2-206ENST00000474617 KRT85P78386 507 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 SCRN1Q12765 414 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 ZSCAN23Q3MJ62 389 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 NAA16Q6N069 864 aaPredicted RBP25.63■■□□□ 1.69
CCM2-206ENST00000474617 C3orf67Q6ZVT6 689 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 FBXO33Q7Z6M2 555 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 TMEM87BQ96K49 555 aa25.63■■□□□ 1.69
CCM2-206ENST00000474617 ELP1O95163 1332 aa25.62■■□□□ 1.69
CCM2-206ENST00000474617 PRC1O43663 620 aa25.62■■□□□ 1.69
CCM2-206ENST00000474617 APPP05067 770 aa25.62■■□□□ 1.69
CCM2-206ENST00000474617 USP48Q86UV5 1035 aa25.62■■□□□ 1.69
CCM2-206ENST00000474617 SCAND2PQ9GZW5 306 aaPredicted RBP25.62■■□□□ 1.69
CCM2-206ENST00000474617 NPHP1O15259 732 aa25.61■■□□□ 1.69
CCM2-206ENST00000474617 PDIA3P30101 505 aaKnown RBP25.61■■□□□ 1.69
CCM2-206ENST00000474617 STK3Q13188 491 aa25.61■■□□□ 1.69
CCM2-206ENST00000474617 COL9A3Q14050 684 aaPredicted RBP25.61■■□□□ 1.69
CCM2-206ENST00000474617 ATL3Q6DD88 541 aa25.61■■□□□ 1.69
CCM2-206ENST00000474617 CNBD1Q8NA66 436 aa25.61■■□□□ 1.69
CCM2-206ENST00000474617 CELF1Q92879 486 aaKnown RBP25.61■■□□□ 1.69
CCM2-206ENST00000474617 NAPBQ9H115 298 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms