RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 XDHP47989 1333 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 PUS7LQ9H0K6 701 aaKnown RBP23.66■■□□□ 1.38
SSR1-204ENST00000474597 ANKRD31Q8N7Z5 1873 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 ZNF532Q9HCE3 1301 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 SEMA3EO15041 775 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 BBOX1O75936 387 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 HOXA10P31260 410 aaPredicted RBP23.65■■□□□ 1.38
SSR1-204ENST00000474597 HIBADHP31937 336 aaKnown RBP23.65■■□□□ 1.38
SSR1-204ENST00000474597 TSGA10IPQ3SY00 556 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 VPS53Q5VIR6 699 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 NOL8Q76FK4 1167 aaKnown RBP23.65■■□□□ 1.38
SSR1-204ENST00000474597 CRAMP1Q96RY5 1269 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 LRP2BPQ9P2M1 347 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 WWC3Q9ULE0 1092 aa23.65■■□□□ 1.38
SSR1-204ENST00000474597 KLRG2A4D1S0 409 aaPredicted RBP23.64■■□□□ 1.38
SSR1-204ENST00000474597 FBXO33Q7Z6M2 555 aa23.64■■□□□ 1.38
SSR1-204ENST00000474597 ZSWIM6Q9HCJ5 1215 aa23.64■■□□□ 1.38
SSR1-204ENST00000474597 QSER1Q2KHR3 1735 aa23.64■■□□□ 1.37
SSR1-204ENST00000474597 GPAA1O43292 621 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 RUFY3Q7L099 469 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 MAGEB6Q8N7X4 407 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 TMX3Q96JJ7 454 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 PDRG1Q9NUG6 133 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 KLRK1P26718 216 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 PDE6BP35913 854 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 BLOC1S2Q6QNY1 142 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 TTC14Q96N46 770 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 CTNNA3Q9UI47 895 aa23.63■■□□□ 1.37
SSR1-204ENST00000474597 RPAP1Q9BWH6 1393 aaPredicted RBP23.63■■□□□ 1.37
SSR1-204ENST00000474597 NBR1Q14596 966 aa23.62■■□□□ 1.37
SSR1-204ENST00000474597 ABCF2Q9UG63 623 aa23.62■■□□□ 1.37
SSR1-204ENST00000474597 CYP21A2P08686 494 aa23.61■■□□□ 1.37
SSR1-204ENST00000474597 CPA1P15085 419 aa23.61■■□□□ 1.37
SSR1-204ENST00000474597 AK2P54819 239 aa23.61■■□□□ 1.37
SSR1-204ENST00000474597 TMC4Q7Z404 712 aa23.61■■□□□ 1.37
SSR1-204ENST00000474597 AIDAQ96BJ3 306 aa23.61■■□□□ 1.37
SSR1-204ENST00000474597 CIZ1Q9ULV3 898 aaPredicted RBP23.61■■□□□ 1.37
SSR1-204ENST00000474597 TCRBV5S4A2TA0A5A2 114 aa23.61■■□□□ 1.37
SSR1-204ENST00000474597 NSFL1CQ9UNZ2 370 aaKnown RBP23.61■■□□□ 1.37
SSR1-204ENST00000474597 NPR1P16066 1061 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 ATP2B4P23634 1241 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 GPSM2P81274 684 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 DEFB132Q7Z7B7 95 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 RAI14Q9P0K7 980 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 PPEF1O14829 653 aaPredicted RBP23.59■■□□□ 1.37
SSR1-204ENST00000474597 DDIT3P35638 169 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 NEK1Q96PY6 1258 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 CWC22Q9HCG8 908 aaKnown RBP23.59■■□□□ 1.37
SSR1-204ENST00000474597 GGA1Q9UJY5 639 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 LIMCH1Q9UPQ0 1083 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 TAF6LQ9Y6J9 622 aa23.59■■□□□ 1.37
SSR1-204ENST00000474597 PDS5AQ29RF7 1337 aaKnown RBP23.58■■□□□ 1.37
SSR1-204ENST00000474597 COL1A1P02452 1464 aaPredicted RBP23.58■■□□□ 1.37
SSR1-204ENST00000474597 UFL1O94874 794 aa23.58■■□□□ 1.37
SSR1-204ENST00000474597 SRGNP10124 158 aa23.58■■□□□ 1.37
SSR1-204ENST00000474597 ZNF804AQ7Z570 1209 aa23.58■■□□□ 1.37
SSR1-204ENST00000474597 RPS6KB1P23443 525 aa23.57■■□□□ 1.36
SSR1-204ENST00000474597 ALDH1B1P30837 517 aa23.57■■□□□ 1.36
SSR1-204ENST00000474597 IMMTQ16891 758 aaKnown RBP23.57■■□□□ 1.36
SSR1-204ENST00000474597 APPP05067 770 aa23.56■■□□□ 1.36
SSR1-204ENST00000474597 CUL4AQ13619 759 aa23.56■■□□□ 1.36
SSR1-204ENST00000474597 ANKRD1Q15327 319 aa23.56■■□□□ 1.36
SSR1-204ENST00000474597 TXNRD3Q86VQ6 643 aa23.56■■□□□ 1.36
SSR1-204ENST00000474597 IRS2Q9Y4H2 1338 aa23.56■■□□□ 1.36
SSR1-204ENST00000474597 HMGB1P09429 215 aaKnown RBP23.56■■□□□ 1.36
SSR1-204ENST00000474597 CHAF1AQ13111 956 aaPredicted RBP23.56■■□□□ 1.36
SSR1-204ENST00000474597 C15orf52Q6ZUT6 534 aaKnown RBP23.56■■□□□ 1.36
SSR1-204ENST00000474597 SLC51AQ86UW1 340 aa23.56■■□□□ 1.36
SSR1-204ENST00000474597 FGAP02671 866 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 CYP7A1P22680 504 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 NFKBIBQ15653 356 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 SP8Q8IXZ3 490 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 MASTLQ96GX5 879 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 TMX4Q9H1E5 349 aaPredicted RBP23.55■■□□□ 1.36
SSR1-204ENST00000474597 PODXL2Q9NZ53 605 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 LAMA4Q16363 1823 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 LRRC37AA6NMS7 1700 aa23.55■■□□□ 1.36
SSR1-204ENST00000474597 MBD4O95243 580 aa23.54■■□□□ 1.36
SSR1-204ENST00000474597 INTS4Q96HW7 963 aaKnown RBP23.54■■□□□ 1.36
SSR1-204ENST00000474597 ZSCAN31Q96LW9 406 aaPredicted RBP23.54■■□□□ 1.36
SSR1-204ENST00000474597 STRBPQ96SI9 672 aaKnown RBP23.54■■□□□ 1.36
SSR1-204ENST00000474597 ZBTB22O15209 634 aa23.54■■□□□ 1.36
SSR1-204ENST00000474597 FOXP2O15409 715 aa23.54■■□□□ 1.36
SSR1-204ENST00000474597 TTLL5Q6EMB2 1281 aa23.54■■□□□ 1.36
SSR1-204ENST00000474597 ZGPATQ8N5A5 531 aaKnown RBP23.54■■□□□ 1.36
SSR1-204ENST00000474597 COL11A2P13942 1736 aaPredicted RBP23.54■■□□□ 1.36
SSR1-204ENST00000474597 CCDC88AQ3V6T2 1871 aa23.53■■□□□ 1.36
SSR1-204ENST00000474597 GNAT2P19087 354 aa23.53■■□□□ 1.36
SSR1-204ENST00000474597 LARP6Q9BRS8 491 aaKnown RBP23.53■■□□□ 1.36
SSR1-204ENST00000474597 ATP6V0A2Q9Y487 856 aa23.53■■□□□ 1.36
SSR1-204ENST00000474597 E7EWF7 191 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 C6orf229H3BNL8 230 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 ZNF213O14771 459 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 NAA16Q6N069 864 aaPredicted RBP23.52■■□□□ 1.36
SSR1-204ENST00000474597 ZNF622Q969S3 477 aaKnown RBP eCLIP23.52■■□□□ 1.361e-9■■■□□ 15.3
SSR1-204ENST00000474597 ALDH8A1Q9H2A2 487 aaPredicted RBP23.52■■□□□ 1.36
SSR1-204ENST00000474597 ARMT1Q9H993 441 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 SH2B1Q9NRF2 756 aaPredicted RBP23.52■■□□□ 1.36
SSR1-204ENST00000474597 CACNA1SQ13698 1873 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 PATL2C9JE40 543 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms