RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CAPN10Q9HC96 672 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 NPHS2Q9NP85 383 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 STRN4Q9NRL3 753 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 RNF19AQ9NV58 838 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 USP31Q70CQ4 1352 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 FAM157BP0CG42 384 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 SYT9Q86SS6 491 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 USP48Q86UV5 1035 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 EPS8L3Q8TE67 593 aaKnown RBP6.48□□□□□ -1.37
BRCA1-212ENST00000473961 ARMC5Q96C12 935 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 PNMA5Q96PV4 448 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 ZFYVE1Q9HBF4 777 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 GGT7Q9UJ14 662 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 KCNH4Q9UQ05 1017 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 INPP5FQ9Y2H2 1132 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 USP20Q9Y2K6 914 aa6.48□□□□□ -1.37
BRCA1-212ENST00000473961 OAS3Q9Y6K5 1087 aaKnown RBP6.48□□□□□ -1.37
BRCA1-212ENST00000473961 HMGB1P09429 215 aaKnown RBP6.47□□□□□ -1.37
BRCA1-212ENST00000473961 CTSHP09668 335 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 USP17L7P0C7H9 530 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
BRCA1-212ENST00000473961 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
BRCA1-212ENST00000473961 SSTR4P31391 388 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 KCNQ4P56696 695 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 PTPN12Q05209 780 aaKnown RBP6.47□□□□□ -1.37
BRCA1-212ENST00000473961 NEUROD1Q13562 356 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 PWP1Q13610 501 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 USPL1Q5W0Q7 1092 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 BCO2Q9BYV7 579 aa6.47□□□□□ -1.37
BRCA1-212ENST00000473961 A0A0A0MRY4 1105 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 RLBP1P12271 317 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 CD97P48960 835 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 CCINQ13939 588 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 TINF2Q9BSI4 451 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 OSBPL7Q9BZF2 842 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 EHD4Q9H223 541 aa6.46□□□□□ -1.38
BRCA1-212ENST00000473961 EREGO14944 169 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 EFSO43281 561 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 SIN3BO75182 1162 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 ARID5AQ03989 594 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 NXPE4Q6UWF7 544 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 C1orf127Q8N9H9 656 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 SPATA32Q96LK8 384 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 NOC4LQ9BVI4 516 aaKnown RBP6.45□□□□□ -1.38
BRCA1-212ENST00000473961 ACBD3Q9H3P7 528 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 MARK1Q9P0L2 795 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 PRKAG2Q9UGJ0 569 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 DDX41Q9UJV9 622 aaKnown RBP6.45□□□□□ -1.38
BRCA1-212ENST00000473961 PPM1HQ9ULR3 514 aa6.45□□□□□ -1.38
BRCA1-212ENST00000473961 TTF2Q9UNY4 1162 aaKnown RBP6.45□□□□□ -1.38
BRCA1-212ENST00000473961 PSAPP07602 524 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 RARAP10276 462 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 SOX18P35713 384 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 TRAPPC3LQ5T215 181 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 SOGA3Q5TF21 947 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 KIAA0319Q5VV43 1072 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 PI16Q6UXB8 463 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 C20orf204Q6ZNR8 217 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 CHRDQ9H2X0 955 aa6.44□□□□□ -1.38
BRCA1-212ENST00000473961 DNAJA1P31689 397 aaKnown RBP6.43□□□□□ -1.38
BRCA1-212ENST00000473961 DIEXFQ68CQ4 756 aaKnown RBP6.43□□□□□ -1.38
BRCA1-212ENST00000473961 OR13H1Q8NG92 308 aa6.43□□□□□ -1.38
BRCA1-212ENST00000473961 TNFRSF25Q93038 417 aa6.43□□□□□ -1.38
BRCA1-212ENST00000473961 SPACA7Q96KW9 195 aa6.43□□□□□ -1.38
BRCA1-212ENST00000473961 GMLQ99445 158 aa6.43□□□□□ -1.38
BRCA1-212ENST00000473961 CNTN3Q9P232 1028 aa6.43□□□□□ -1.38
BRCA1-212ENST00000473961 SASH3O75995 380 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 POLR3DP05423 398 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-212ENST00000473961 GP2P55259 537 aaKnown RBP6.42□□□□□ -1.38
BRCA1-212ENST00000473961 HYAL2Q12891 473 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 GRM2Q14416 872 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 ZNF394Q53GI3 561 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 MEI1Q5TIA1 1274 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 PRPF40BQ6NWY9 871 aaKnown RBP6.42□□□□□ -1.38
BRCA1-212ENST00000473961 NCAPG2Q86XI2 1143 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 RELL1Q8IUW5 271 aa6.42□□□□□ -1.38
BRCA1-212ENST00000473961 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-212ENST00000473961 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-212ENST00000473961 GTF2F1P35269 517 aaKnown RBP eCLIP6.41□□□□□ -1.38
BRCA1-212ENST00000473961 PLAURQ03405 335 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 CCDC85BQ15834 202 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-212ENST00000473961 PCSK7Q16549 785 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 DTHD1Q6ZMT9 781 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 KRT25Q7Z3Z0 450 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 ANKRD24Q8TF21 1146 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 GSX2Q9BZM3 304 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 CEP44Q9C0F1 390 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 LIN7BQ9HAP6 207 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 PCDHGB7Q9Y5F8 929 aa6.41□□□□□ -1.38
BRCA1-212ENST00000473961 A0A1W2PP55 124 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 MMP20O60882 483 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 GRNP28799 593 aaKnown RBP6.4□□□□□ -1.38
BRCA1-212ENST00000473961 ADH7P40394 386 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 FCGRTP55899 365 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 ERMP1Q7Z2K6 904 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms