RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 MYH13Q9UKX3 1938 aa21.49■■□□□ 1.03
VARS2-206ENST00000473916 SERPINB2P05120 415 aa21.49■■□□□ 1.03
VARS2-206ENST00000473916 ST3GAL1Q11201 340 aa21.49■■□□□ 1.03
VARS2-206ENST00000473916 UBE4AQ14139 1066 aa21.49■■□□□ 1.03
VARS2-206ENST00000473916 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
VARS2-206ENST00000473916 PLSCR1O15162 318 aa21.48■■□□□ 1.03
VARS2-206ENST00000473916 TOB2Q14106 344 aaPredicted RBP21.48■■□□□ 1.03
VARS2-206ENST00000473916 AKT1S1Q96B36 256 aa21.48■■□□□ 1.03
VARS2-206ENST00000473916 INTS4Q96HW7 963 aaKnown RBP21.48■■□□□ 1.03
VARS2-206ENST00000473916 NEK1Q96PY6 1258 aa21.48■■□□□ 1.03
VARS2-206ENST00000473916 ME3Q16798 604 aa21.47■■□□□ 1.03
VARS2-206ENST00000473916 MAGEB6Q8N7X4 407 aa21.47■■□□□ 1.03
VARS2-206ENST00000473916 FAM84BQ96KN1 310 aaPredicted RBP21.47■■□□□ 1.03
VARS2-206ENST00000473916 POLRMTO00411 1230 aaKnown RBP21.46■■□□□ 1.03
VARS2-206ENST00000473916 HAND2P61296 217 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 KRT32Q14532 448 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 UBE3CQ15386 1083 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 FOXD4L5Q5VV16 416 aaPredicted RBP21.46■■□□□ 1.03
VARS2-206ENST00000473916 ZSCAN25Q6NSZ9 544 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 COL23A1Q86Y22 540 aaPredicted RBP21.46■■□□□ 1.03
VARS2-206ENST00000473916 NECAB1Q8N987 351 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 FOXD4L4Q8WXT5 416 aaPredicted RBP21.46■■□□□ 1.03
VARS2-206ENST00000473916 LRRC2Q9BYS8 371 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 CCDC83Q8IWF9 413 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 CHAMP1Q96JM3 812 aa21.46■■□□□ 1.03
VARS2-206ENST00000473916 FGAP02671 866 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 TXNRD3Q86VQ6 643 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 IL27Q8NEV9 243 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 E7EWF7 191 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 NUCB2P80303 420 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 GRAPQ13588 217 aa21.45■■□□□ 1.02
VARS2-206ENST00000473916 GRAPLQ8TC17 118 aaPredicted RBP21.45■■□□□ 1.02
VARS2-206ENST00000473916 ST5P78524 1137 aa21.43■■□□□ 1.02
VARS2-206ENST00000473916 MAP3K12Q12852 859 aa21.43■■□□□ 1.02
VARS2-206ENST00000473916 CAVIN4Q5BKX8 364 aa21.43■■□□□ 1.02
VARS2-206ENST00000473916 Q6ZUG5 572 aa21.43■■□□□ 1.02
VARS2-206ENST00000473916 VPS37DQ86XT2 251 aa21.43■■□□□ 1.02
VARS2-206ENST00000473916 CACNA1SQ13698 1873 aa21.42■■□□□ 1.02
VARS2-206ENST00000473916 CRY2Q49AN0 593 aa21.42■■□□□ 1.02
VARS2-206ENST00000473916 FBXO33Q7Z6M2 555 aa21.42■■□□□ 1.02
VARS2-206ENST00000473916 RPGRQ92834 1020 aaKnown RBP21.42■■□□□ 1.02
VARS2-206ENST00000473916 ANKRD2Q9GZV1 360 aa21.42■■□□□ 1.02
VARS2-206ENST00000473916 LRP2BPQ9P2M1 347 aa21.42■■□□□ 1.02
VARS2-206ENST00000473916 ABCF2Q9UG63 623 aa21.42■■□□□ 1.02
VARS2-206ENST00000473916 MBD4O95243 580 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 ADGRA1Q86SQ6 560 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 GPR101Q96P66 508 aaPredicted RBP21.41■■□□□ 1.02
VARS2-206ENST00000473916 STRBPQ96SI9 672 aaKnown RBP21.41■■□□□ 1.02
VARS2-206ENST00000473916 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 BAG4O95429 457 aaKnown RBP21.41■■□□□ 1.02
VARS2-206ENST00000473916 STK3Q13188 491 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 AIDAQ96BJ3 306 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 GBP4Q96PP9 640 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 NBPF3Q9H094 633 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 ALDH8A1Q9H2A2 487 aaPredicted RBP21.41■■□□□ 1.02
VARS2-206ENST00000473916 ARMT1Q9H993 441 aa21.41■■□□□ 1.02
VARS2-206ENST00000473916 GNL3LQ9NVN8 582 aaKnown RBP21.41■■□□□ 1.02
VARS2-206ENST00000473916 MIGA1Q8NAN2 632 aa21.4■■□□□ 1.02
VARS2-206ENST00000473916 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
VARS2-206ENST00000473916 SH2B1Q9NRF2 756 aaPredicted RBP21.4■■□□□ 1.02
VARS2-206ENST00000473916 JAG2Q9Y219 1238 aa21.4■■□□□ 1.02
VARS2-206ENST00000473916 ANKIB1Q9P2G1 1089 aa21.39■■□□□ 1.02
VARS2-206ENST00000473916 DENND2AQ9ULE3 1009 aa21.39■■□□□ 1.02
VARS2-206ENST00000473916 BRD1O95696 1058 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 APPP05067 770 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 IMMTQ16891 758 aaKnown RBP21.39■■□□□ 1.01
VARS2-206ENST00000473916 MSL1Q68DK7 614 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 LCORLQ8N3X6 602 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 NKX2-3Q8TAU0 364 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 EPB41L4AQ9HCS5 686 aaPredicted RBP21.39■■□□□ 1.01
VARS2-206ENST00000473916 CTNNA3Q9UI47 895 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 PNPLA7Q6ZV29 1317 aa21.39■■□□□ 1.01
VARS2-206ENST00000473916 NRXN2Q9P2S2 1712 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
VARS2-206ENST00000473916 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 PRKAB2O43741 272 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 EXOSC10Q01780 885 aaKnown RBP21.38■■□□□ 1.01
VARS2-206ENST00000473916 CLEC17AQ6ZS10 378 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 DHX32Q7L7V1 743 aaKnown RBP21.38■■□□□ 1.01
VARS2-206ENST00000473916 ZNF384Q8TF68 577 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 BRF1Q92994 677 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 CHD4Q14839 1912 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 HIBADHP31937 336 aaKnown RBP21.38■■□□□ 1.01
VARS2-206ENST00000473916 ANKRD1Q15327 319 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 RAI14Q9P0K7 980 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 SMC3Q9UQE7 1217 aa21.38■■□□□ 1.01
VARS2-206ENST00000473916 DDX11L8A8MPP1 907 aa21.37■■□□□ 1.01
VARS2-206ENST00000473916 GPSM2P81274 684 aa21.37■■□□□ 1.01
VARS2-206ENST00000473916 GPHNQ9NQX3 736 aaPredicted RBP21.37■■□□□ 1.01
VARS2-206ENST00000473916 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.37■■□□□ 1.01
VARS2-206ENST00000473916 CYP7A1P22680 504 aa21.36■■□□□ 1.01
VARS2-206ENST00000473916 GJB2P29033 226 aa21.36■■□□□ 1.01
VARS2-206ENST00000473916 CHAF1AQ13111 956 aaPredicted RBP21.36■■□□□ 1.01
VARS2-206ENST00000473916 TBC1D10CQ8IV04 446 aa21.36■■□□□ 1.01
VARS2-206ENST00000473916 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
VARS2-206ENST00000473916 COL11A2P13942 1736 aaPredicted RBP21.36■■□□□ 1.01
VARS2-206ENST00000473916 TCHHQ07283 1943 aa21.36■■□□□ 1.01
VARS2-206ENST00000473916 ZNF213O14771 459 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms