RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DPP8Q6V1X1 898 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-205ENST00000472928 SP8Q8IXZ3 490 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 MPNDQ8N594 471 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 ZBTB3Q9H5J0 574 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 IFT57Q9NWB7 429 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 PSMD14O00487 310 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 RIMBP2O15034 1052 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 RRP1P56182 461 aaKnown RBP8.14□□□□□ -1.11
HDAC1-205ENST00000472928 GNAI1P63096 354 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 IRX6P78412 446 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-205ENST00000472928 TAF7Q15545 349 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-205ENST00000472928 TBC1D10BQ4KMP7 808 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-205ENST00000472928 GPR153Q6NV75 609 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 PADI6Q6TGC4 694 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 KIF6Q6ZMV9 814 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 METTL3Q86U44 580 aaKnown RBP8.14□□□□□ -1.11
HDAC1-205ENST00000472928 RASAL3Q86YV0 1011 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 C2orf69Q8N8R5 385 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 TTC13Q8NBP0 860 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 DPF2Q92785 391 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 ADAM33Q9BZ11 813 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 GOPCQ9HD26 462 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 RBM27Q9P2N5 1060 aaKnown RBP8.14□□□□□ -1.11
HDAC1-205ENST00000472928 A0A0C4DFX4 3053 aa8.14□□□□□ -1.11
HDAC1-205ENST00000472928 RTL9Q8NET4 1388 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 ASTN2O75129 1339 aaPredicted RBP8.13□□□□□ -1.11
HDAC1-205ENST00000472928 HTATSF1O43719 755 aaKnown RBP8.13□□□□□ -1.11
HDAC1-205ENST00000472928 BBOX1O75936 387 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 MYL6BP14649 208 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 PARP10Q53GL7 1025 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 HABP4Q5JVS0 413 aaKnown RBP8.13□□□□□ -1.11
HDAC1-205ENST00000472928 ZNF296Q8WUU4 475 aaPredicted RBP8.13□□□□□ -1.11
HDAC1-205ENST00000472928 TMX4Q9H1E5 349 aaPredicted RBP8.13□□□□□ -1.11
HDAC1-205ENST00000472928 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 ADGRG1Q9Y653 693 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 CENPFP49454 3210 aa8.13□□□□□ -1.11
HDAC1-205ENST00000472928 RANBP2P49792 3224 aaKnown RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 SZT2Q5T011 3432 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 OATP04181 439 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 ZNF853P0CG23 659 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 EIF4A1P60842 406 aaKnown RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 EXOSC9Q06265 439 aaKnown RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 GRAPQ13588 217 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 PKN2Q16513 984 aaKnown RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 PPP1R42Q7Z4L9 355 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 GCC1Q96CN9 775 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 CDCA5Q96FF9 252 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
HDAC1-205ENST00000472928 DBNDD1Q9H9R9 158 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 SCUBE2Q9NQ36 999 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 KCNQ5Q9NR82 932 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 GGA3Q9NZ52 723 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 BRCA2P51587 3418 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 LAMB2P55268 1798 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 LRRC37AA6NMS7 1700 aa8.12□□□□□ -1.11
HDAC1-205ENST00000472928 TBC1D8O95759 1140 aa8.11□□□□□ -1.11
HDAC1-205ENST00000472928 RPS12P25398 132 aaKnown RBP8.11□□□□□ -1.11
HDAC1-205ENST00000472928 KIF4BQ2VIQ3 1234 aa8.11□□□□□ -1.11
HDAC1-205ENST00000472928 PXYLP1Q8TE99 480 aa8.11□□□□□ -1.11
HDAC1-205ENST00000472928 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
HDAC1-205ENST00000472928 TSPYL4Q9UJ04 414 aa8.11□□□□□ -1.11
HDAC1-205ENST00000472928 TAF1P21675 1872 aa8.11□□□□□ -1.11
HDAC1-205ENST00000472928 ANKRD36CQ5JPF3 1778 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 SCN9AQ15858 1988 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 CT47B1P0C2W7 299 aaPredicted RBP8.1□□□□□ -1.11
HDAC1-205ENST00000472928 FXR1P51114 621 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC1-205ENST00000472928 PRSS12P56730 875 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 PROSER3Q2NL68 480 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 FBXO46Q6PJ61 603 aaPredicted RBP8.1□□□□□ -1.11
HDAC1-205ENST00000472928 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 MOB2Q70IA6 237 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 NLRP10Q86W26 655 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 SULF1Q8IWU6 871 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 ANP32EQ9BTT0 268 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 HDAC9Q9UKV0 1011 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 COL4A1P02462 1669 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
HDAC1-205ENST00000472928 CHL1O00533 1208 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 PLIN1O60240 522 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 ECE2O60344 883 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 BCAR3O75815 825 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 SSTR3P32745 418 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-205ENST00000472928 RARSP54136 660 aaKnown RBP8.09□□□□□ -1.11
HDAC1-205ENST00000472928 FKBP1BP68106 108 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 NOM1Q5C9Z4 860 aaKnown RBP8.09□□□□□ -1.11
HDAC1-205ENST00000472928 DDX46Q7L014 1031 aaKnown RBP8.09□□□□□ -1.11
HDAC1-205ENST00000472928 TMC4Q7Z404 712 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 ZNF710Q8N1W2 664 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-205ENST00000472928 NLRP7Q8WX94 980 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 R3HDMLQ9H3Y0 253 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 SMC4Q9NTJ3 1288 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms