RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 SPRED3Q2MJR0 410 aa9.12□□□□□ -0.95
HDAC9-221ENST00000471887 BCO2Q9BYV7 579 aa9.12□□□□□ -0.95
HDAC9-221ENST00000471887 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
HDAC9-221ENST00000471887 SEC31BQ9NQW1 1179 aa9.12□□□□□ -0.95
HDAC9-221ENST00000471887 SPG7Q9UQ90 795 aa9.12□□□□□ -0.95
HDAC9-221ENST00000471887 TMEM238LA0A1B0GVL6 79 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 C9orf172C9J069 976 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 DLL1O00548 723 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 ITPKAP23677 461 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 ARL4DP49703 201 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
HDAC9-221ENST00000471887 PTPN12Q05209 780 aaKnown RBP9.11□□□□□ -0.95
HDAC9-221ENST00000471887 IGF2-ASQ6U949 168 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 GLIS3Q8NEA6 775 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-221ENST00000471887 CARD10Q9BWT7 1032 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 CLEC4MQ9H2X3 399 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-221ENST00000471887 OSGEPQ9NPF4 335 aa9.11□□□□□ -0.95
HDAC9-221ENST00000471887 GIPC1O14908 333 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 SELPP16109 830 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 CD68P34810 354 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-221ENST00000471887 PLA2G4EQ3MJ16 856 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 NXPE4Q6UWF7 544 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 SHISA2Q6UWI4 295 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 GALNT11Q8NCW6 608 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 SRCIN1Q9C0H9 1055 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 ZFYVE1Q9HBF4 777 aa9.1□□□□□ -0.95
HDAC9-221ENST00000471887 ESRRAP11474 423 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-221ENST00000471887 CHRNA4P43681 627 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-221ENST00000471887 PCDH1Q08174 1060 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 C19orf57Q0VDD7 668 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 SUZ12Q15022 739 aaKnown RBP9.09□□□□□ -0.95
HDAC9-221ENST00000471887 CD163Q86VB7 1156 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 FRMD6Q96NE9 622 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 ZNF576Q9H609 170 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 USP21Q9UK80 565 aa9.09□□□□□ -0.95
HDAC9-221ENST00000471887 C1QTNF9BB2RNN3 333 aa9.08□□□□□ -0.96
HDAC9-221ENST00000471887 SOX1O00570 391 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-221ENST00000471887 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
HDAC9-221ENST00000471887 FCGRTP55899 365 aa9.08□□□□□ -0.96
HDAC9-221ENST00000471887 DTHD1Q6ZMT9 781 aa9.08□□□□□ -0.96
HDAC9-221ENST00000471887 FBXO33Q7Z6M2 555 aa9.08□□□□□ -0.96
HDAC9-221ENST00000471887 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
HDAC9-221ENST00000471887 SOX17Q9H6I2 414 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-221ENST00000471887 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-221ENST00000471887 GNA15P30679 374 aa9.07□□□□□ -0.96
HDAC9-221ENST00000471887 FOXD4L6Q3SYB3 417 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-221ENST00000471887 FOXD4L3Q6VB84 417 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-221ENST00000471887 KLHDC7BQ96G42 594 aa9.07□□□□□ -0.96
HDAC9-221ENST00000471887 DUSP9Q99956 384 aaKnown RBP9.07□□□□□ -0.96
HDAC9-221ENST00000471887 OSBPL7Q9BZF2 842 aa9.07□□□□□ -0.96
HDAC9-221ENST00000471887 TM4SF5O14894 197 aa9.06□□□□□ -0.96
HDAC9-221ENST00000471887 RPS26P11Q5JNZ5 115 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-221ENST00000471887 C12orf49Q9H741 205 aa9.06□□□□□ -0.96
HDAC9-221ENST00000471887 ITGB2P05107 769 aa9.05□□□□□ -0.96
HDAC9-221ENST00000471887 GSTT1P30711 240 aa9.05□□□□□ -0.96
HDAC9-221ENST00000471887 ADGRE1Q14246 886 aa9.05□□□□□ -0.96
HDAC9-221ENST00000471887 ZNF423Q2M1K9 1284 aa9.05□□□□□ -0.96
HDAC9-221ENST00000471887 HGSNATQ68CP4 663 aa9.05□□□□□ -0.96
HDAC9-221ENST00000471887 DDX54Q8TDD1 881 aaKnown RBP9.05□□□□□ -0.96
HDAC9-221ENST00000471887 FAM8A1Q9UBU6 413 aa9.05□□□□□ -0.96
HDAC9-221ENST00000471887 B3GALT4O96024 378 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 NLRP12P59046 1061 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 XPCQ01831 940 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-221ENST00000471887 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 GPAT2Q6NUI2 795 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 BCL2L13Q9BXK5 485 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 KCNK4Q9NYG8 393 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
HDAC9-221ENST00000471887 DDX3YO15523 660 aaKnown RBP9.03□□□□□ -0.96
HDAC9-221ENST00000471887 ADAM11O75078 769 aa9.03□□□□□ -0.96
HDAC9-221ENST00000471887 EIF4BP23588 611 aaKnown RBP9.03□□□□□ -0.96
HDAC9-221ENST00000471887 GATA4P43694 442 aa9.03□□□□□ -0.96
HDAC9-221ENST00000471887 GSTM4Q03013 218 aa9.03□□□□□ -0.96
HDAC9-221ENST00000471887 TXNRD3Q86VQ6 643 aa9.03□□□□□ -0.96
HDAC9-221ENST00000471887 TMEM130Q8N3G9 435 aa9.03□□□□□ -0.96
HDAC9-221ENST00000471887 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-221ENST00000471887 PARP2Q9UGN5 583 aa9.03□□□□□ -0.96
HDAC9-221ENST00000471887 IGHA1P01876 353 aa9.02□□□□□ -0.97
HDAC9-221ENST00000471887 PSMD2Q13200 908 aa9.02□□□□□ -0.97
HDAC9-221ENST00000471887 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
HDAC9-221ENST00000471887 C3orf58Q8NDZ4 430 aa9.02□□□□□ -0.97
HDAC9-221ENST00000471887 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
HDAC9-221ENST00000471887 AK5Q9Y6K8 562 aa9.02□□□□□ -0.97
HDAC9-221ENST00000471887 F8W735 103 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-221ENST00000471887 MSTNO14793 375 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 WISP1O95388 367 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 USP17L7P0C7H9 530 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 DAB2P98082 770 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 FAAP100Q0VG06 881 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 ZNF326Q5BKZ1 582 aaKnown RBP9.01□□□□□ -0.97
HDAC9-221ENST00000471887 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.01□□□□□ -0.97
HDAC9-221ENST00000471887 WFDC12Q8WWY7 111 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 RNF19AQ9NV58 838 aa9.01□□□□□ -0.97
HDAC9-221ENST00000471887 GPN3Q9UHW5 284 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-221ENST00000471887 CYP11A1P05108 521 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 ITGAEP38570 1179 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms