RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 K7ELQ4 463 aaPredicted RBP9.75□□□□□ -0.85
CD47-204ENST00000471694 DAPK3O43293 454 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 SMTNP53814 917 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 BIRC3Q13489 604 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 ERFEQ4G0M1 354 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 FAM89AQ96GI7 184 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 MAK16Q9BXY0 300 aaKnown RBP9.75□□□□□ -0.85
CD47-204ENST00000471694 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 SUPT20HL1Q3ZLR7 823 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 GSDMBQ8TAX9 411 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 IP6K1Q92551 441 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 KLF18A0A0U1RQI7 1052 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 TEKT1Q969V4 418 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 MED10Q9BTT4 135 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 PPEF1O14829 653 aaPredicted RBP9.75□□□□□ -0.85
CD47-204ENST00000471694 HOXC9P31274 260 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 NEK1Q96PY6 1258 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 IFFO1Q0D2I5 559 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 KRT79Q5XKE5 535 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 PRPF31Q8WWY3 499 aaKnown RBP9.75□□□□□ -0.85
CD47-204ENST00000471694 MAP2K1Q02750 393 aaPredicted RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 ANKRD35Q8N283 1001 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 PAG1Q9NWQ8 432 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 ABCC1P33527 1531 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 KRT5P13647 590 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 PDE4DQ08499 809 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 MBIPQ9NS73 344 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 YEATS4O95619 227 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 HOXD10P28358 340 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 WDR44Q5JSH3 913 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 AATFQ9NY61 560 aaKnown RBP eCLIP9.74□□□□□ -0.85
CD47-204ENST00000471694 MAP3K5Q99683 1374 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 GCOM1H8Y6P7 765 aaPredicted RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 MYZAPP0CAP1 466 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 GNA11P29992 359 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 IREB2P48200 963 aaKnown RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 RSPH3Q86UC2 560 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 NSMCE1Q8WV22 266 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 PPM1EQ8WY54 764 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 ARAP1Q96P48 1450 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 MAEAQ7L5Y9 396 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 NAP1L4Q99733 375 aaKnown RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 LBHD1Q9BQE6 289 aaPredicted RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 RIOK1Q9BRS2 568 aaKnown RBP9.74□□□□□ -0.85
CD47-204ENST00000471694 HAUS2Q9NVX0 235 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 NSD2O96028 1365 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 FLT4P35916 1363 aa9.74□□□□□ -0.85
CD47-204ENST00000471694 KRT19P08727 400 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 SCNN1DP51172 638 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 ASIC1P78348 528 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 CCDC50Q8IVM0 306 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 ATP10AO60312 1499 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 RPRD2Q5VT52 1461 aaKnown RBP9.73□□□□□ -0.85
CD47-204ENST00000471694 FSD2A1L4K1 749 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 RASA3Q14644 834 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 PUM3Q15397 648 aaKnown RBP9.73□□□□□ -0.85
CD47-204ENST00000471694 Q3C1V9 767 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 KIAA0825Q8IV33 1275 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 SH2B1Q9NRF2 756 aaPredicted RBP9.73□□□□□ -0.85
CD47-204ENST00000471694 IRAK4Q9NWZ3 460 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 TBX22Q9Y458 520 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 ANKRD36BQ8N2N9 1353 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 GOLGA6L10A0A0M3HER8 536 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 ZBBXA8MT70 800 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 PDIA4P13667 645 aaKnown RBP9.73□□□□□ -0.85
CD47-204ENST00000471694 TERF1P54274 439 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 EIF4A2Q14240 407 aaKnown RBP9.73□□□□□ -0.85
CD47-204ENST00000471694 BCCIPQ9P287 314 aaKnown RBP eCLIP9.73□□□□□ -0.85
CD47-204ENST00000471694 SLC1A4P43007 532 aa9.73□□□□□ -0.85
CD47-204ENST00000471694 IFRD2Q12894 506 aaPredicted RBP9.73□□□□□ -0.85
CD47-204ENST00000471694 TAF5LO75529 589 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 GSTA5Q7RTV2 222 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 CCDC114Q96M63 670 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
CD47-204ENST00000471694 PRPF6O94906 941 aaKnown RBP9.72□□□□□ -0.85
CD47-204ENST00000471694 OATP04181 439 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 SSFA2P28290 1259 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 KRT2P35908 639 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 TBC1D22AQ8WUA7 517 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 SSH1Q8WYL5 1049 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 ALG1Q9BT22 464 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
CD47-204ENST00000471694 IGBP1P78318 339 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 RNASELQ05823 741 aaKnown RBP9.72□□□□□ -0.85
CD47-204ENST00000471694 KCTD2Q14681 263 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 NLRX1Q86UT6 975 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms