RNA–Protein interactions for RNA: ENST00000471390.5

CCDC30-206, Transcript of coiled-coil domain containing 30, humanhuman

TSL 5

Gene CCDC30, Length 2,559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-206ENST00000471390 SMNDC1O75940 238 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC30-206ENST00000471390 CDK8P49336 464 aa4.82□□□□□ -1.64
CCDC30-206ENST00000471390 KIAA0319Q5VV43 1072 aa4.82□□□□□ -1.64
CCDC30-206ENST00000471390 GALNT11Q8NCW6 608 aa4.82□□□□□ -1.64
CCDC30-206ENST00000471390 ACBD3Q9H3P7 528 aa4.82□□□□□ -1.64
CCDC30-206ENST00000471390 ZNF576Q9H609 170 aa4.82□□□□□ -1.64
CCDC30-206ENST00000471390 KBTBD4Q9NVX7 518 aa4.82□□□□□ -1.64
CCDC30-206ENST00000471390 NSFL1CQ9UNZ2 370 aaKnown RBP4.82□□□□□ -1.64
CCDC30-206ENST00000471390 ADARB2-AS1A8MUL3 147 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 CTSBP07858 339 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 SLURP2P0DP57 97 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 ALAS2P22557 587 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-206ENST00000471390 COL9A3Q14050 684 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-206ENST00000471390 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-206ENST00000471390 TRIM11Q96F44 468 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 RBSNQ9H1K0 784 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 SEC31BQ9NQW1 1179 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 FAM8A1Q9UBU6 413 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 SOX1O00570 391 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-206ENST00000471390 DLGAP3O95886 979 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 BCRP11274 1271 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 GRIK4Q16099 956 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 METTL16Q86W50 562 aaKnown RBP4.81□□□□□ -1.64
CCDC30-206ENST00000471390 KLHDC7BQ96G42 594 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 KCNK4Q9NYG8 393 aa4.81□□□□□ -1.64
CCDC30-206ENST00000471390 DEAF1O75398 565 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 NEFLP07196 543 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 RANGAP1P46060 587 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 PTPN11Q06124 597 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 COL19A1Q14993 1142 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 TMEM102Q8N9M5 508 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 BSNDQ8WZ55 320 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 PMEPA1Q969W9 287 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 CBX8Q9HC52 389 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 GDF2Q9UK05 429 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 PCDHB5Q9Y5E4 795 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 CNTNAP5Q8WYK1 1306 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 ADAM11O75078 769 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 ZNF76P36508 570 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 DGKGP49619 791 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 GSTM4Q03013 218 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 RAD51AP2Q09MP3 1159 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 SEPT6Q14141 434 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 WDR89Q96FK6 387 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 BHLHE41Q9C0J9 482 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-206ENST00000471390 IGSF5Q9NSI5 407 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 SOX13Q9UN79 622 aa4.8□□□□□ -1.64
CCDC30-206ENST00000471390 WISP1O95388 367 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 ERCC5P28715 1186 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 GSTT1P30711 240 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 PCDH1Q08174 1060 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 IKBKEQ14164 716 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 TAF1CQ15572 869 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 MAP1SQ66K74 1059 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 AGGF1Q8N302 714 aaeCLIP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 PPP1R1BQ9UD71 204 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 ESRRAP11474 423 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 NID1P14543 1247 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 FOXD4L6Q3SYB3 417 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 TRAPPC3LQ5T215 181 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 FOXD4L3Q6VB84 417 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 FBXO27Q8NI29 283 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 USP26Q9BXU7 913 aa4.79□□□□□ -1.64
CCDC30-206ENST00000471390 CLEC4MQ9H2X3 399 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-206ENST00000471390 PTPRAP18433 802 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 MSL1Q68DK7 614 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 USP48Q86UV5 1035 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 UBASH3BQ8TF42 649 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 JARID2Q92833 1246 aaPredicted RBP4.78□□□□□ -1.64
CCDC30-206ENST00000471390 C11orf16Q9NQ32 467 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 CSADQ9Y600 493 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 TLR3O15455 904 aaKnown RBP4.78□□□□□ -1.64
CCDC30-206ENST00000471390 ALX3O95076 343 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 HOXD8P13378 290 aaPredicted RBP4.78□□□□□ -1.64
CCDC30-206ENST00000471390 ITPKAP23677 461 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 CDC27P30260 824 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 GBP2P32456 591 aaPredicted RBP4.78□□□□□ -1.64
CCDC30-206ENST00000471390 SETDB1Q15047 1291 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 WFDC8Q8IUA0 241 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 PLVAPQ9BX97 442 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 PPME1Q9Y570 386 aa4.78□□□□□ -1.64
CCDC30-206ENST00000471390 SCAMP3O14828 347 aaKnown RBP4.77□□□□□ -1.65
CCDC30-206ENST00000471390 CRKP46108 304 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 PCNX4Q63HM2 1172 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 PRPF40BQ6NWY9 871 aaKnown RBP4.77□□□□□ -1.65
CCDC30-206ENST00000471390 BNC2Q6ZN30 1099 aaPredicted RBP4.77□□□□□ -1.65
CCDC30-206ENST00000471390 KCNB2Q92953 911 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 NECAB3Q96P71 396 aaPredicted RBP4.77□□□□□ -1.65
CCDC30-206ENST00000471390 AVENQ9NQS1 362 aaPredicted RBP4.77□□□□□ -1.65
CCDC30-206ENST00000471390 UBP1Q9NZI7 540 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 FSCN2O14926 492 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 TTBK2Q6IQ55 1244 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 RNF34Q969K3 372 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 TRAK1Q9UPV9 953 aa4.77□□□□□ -1.65
CCDC30-206ENST00000471390 IGSF3O75054 1194 aa4.76□□□□□ -1.65
CCDC30-206ENST00000471390 DRD2P14416 443 aa4.76□□□□□ -1.65
CCDC30-206ENST00000471390 MAOBP27338 520 aa4.76□□□□□ -1.65
CCDC30-206ENST00000471390 KANK3Q6NY19 840 aa4.76□□□□□ -1.65
CCDC30-206ENST00000471390 USP31Q70CQ4 1352 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms