RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 TUBBP07437 444 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 NAPGQ99747 312 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-219ENST00000470668 PLEKHA4Q9H4M7 779 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 EIF2AK4Q9P2K8 1649 aaKnown RBP16.16■□□□□ 0.18
HDAC7-219ENST00000470668 RIMS2Q9UQ26 1411 aa16.16■□□□□ 0.18
HDAC7-219ENST00000470668 MACROD2A1Z1Q3 448 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 ZBTB43O43298 467 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 RANBP6O60518 1105 aaKnown RBP16.15■□□□□ 0.18
HDAC7-219ENST00000470668 GOLGA8FQ08AF8 430 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 GOLGA8DPQ0D2H9 430 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 GOLGA5Q8TBA6 731 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 EYA1Q99502 592 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 SPTLC3Q9NUV7 552 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 IRX5P78411 483 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-219ENST00000470668 CPLX4Q7Z7G2 160 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 CCDC43Q96MW1 224 aaKnown RBP16.15■□□□□ 0.18
HDAC7-219ENST00000470668 VPS16Q9H269 839 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC7-219ENST00000470668 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-219ENST00000470668 ADCK5Q3MIX3 580 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 KMT5BQ4FZB7 885 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 CFAP58Q5T655 872 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 ST7Q9NRC1 585 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 ABCC4O15439 1325 aa16.15■□□□□ 0.18
HDAC7-219ENST00000470668 TDRD7Q8NHU6 1098 aaKnown RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 CTCFLQ8NI51 663 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 MKRN1Q9UHC7 482 aaKnown RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 ELP1O95163 1332 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 UBA7P41226 1012 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 KLHDC4Q8TBB5 520 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 PSMB7Q99436 277 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.174e-6■■■□□ 19
HDAC7-219ENST00000470668 MYO1CO00159 1063 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 GRM8O00222 908 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 TACC1O75410 805 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 VAV2P52735 878 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 NLRP5P59047 1200 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 ZRSR2Q15696 482 aaKnown RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 C11orf57Q6ZUT1 292 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-219ENST00000470668 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 MAST1Q9Y2H9 1570 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 UBXN1Q04323 297 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 SOGA3Q5TF21 947 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 PPP1R13BQ96KQ4 1090 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 KIF2CQ99661 725 aa16.14■□□□□ 0.17
HDAC7-219ENST00000470668 UBE4AQ14139 1066 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 JRKLQ9Y4A0 524 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 TLDC2A0PJX2 215 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 NBPF7P0C2Y1 421 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-219ENST00000470668 TUBB4BP68371 445 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 SPAG1Q07617 926 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 CCDC42Q96M95 316 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 TNRQ92752 1358 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 CLNS1AP54105 237 aaKnown RBP16.13■□□□□ 0.17
HDAC7-219ENST00000470668 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
HDAC7-219ENST00000470668 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 KIAA1468Q9P260 1216 aa16.13■□□□□ 0.17
HDAC7-219ENST00000470668 LUC7L2Q9Y383 392 aaKnown RBP16.13■□□□□ 0.17
HDAC7-219ENST00000470668 KDM5CP41229 1560 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 TCEAL9Q9UHQ7 104 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 MAPK8IP1Q9UQF2 711 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 CAPN7Q9Y6W3 813 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 A0A1B0GUA9 196 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 SMIM23A6NLE4 172 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 KIF6Q6ZMV9 814 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 SND1Q7KZF4 910 aaKnown RBP eCLIP16.12■□□□□ 0.17
HDAC7-219ENST00000470668 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 GSTTP1A0A1W2PQM5 241 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 GOLGA6BA6NDN3 693 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 NLRP12P59046 1061 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 ATP2B2Q01814 1243 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 SLF1Q9BQI6 1058 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 PPP2R2CQ9Y2T4 447 aa16.12■□□□□ 0.17
HDAC7-219ENST00000470668 ACTN2P35609 894 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 RNASE9P60153 205 aaKnown RBP16.11■□□□□ 0.17
HDAC7-219ENST00000470668 LONRF2Q1L5Z9 754 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 BCAS4Q8TDM0 211 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 CABLES1Q8TDN4 633 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 MMRN2Q9H8L6 949 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 RGS12O14924 1447 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 ARID5AQ03989 594 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 RAD51AP2Q09MP3 1159 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 BRD3Q15059 726 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 NPATQ14207 1427 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 KRT83P78385 493 aa16.11■□□□□ 0.17
HDAC7-219ENST00000470668 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms