RNA–Protein interactions for RNA: ENST00000470314.5

NINJ1-203, Transcript of ninjurin 1, humanhuman

TSL 3

Gene NINJ1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-203ENST00000470314 GTF3C6Q969F1 213 aa16.18■□□□□ 0.18
NINJ1-203ENST00000470314 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
NINJ1-203ENST00000470314 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
NINJ1-203ENST00000470314 MTMR6Q9Y217 621 aa16.18■□□□□ 0.18
NINJ1-203ENST00000470314 ARAP2Q8WZ64 1704 aa16.18■□□□□ 0.18
NINJ1-203ENST00000470314 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
NINJ1-203ENST00000470314 ZNF213O14771 459 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 SEMA3EO15041 775 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 GNAT2P19087 354 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 ZNF445P59923 1031 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 RPS8P62241 208 aaKnown RBP16.17■□□□□ 0.18
NINJ1-203ENST00000470314 CSPP1Q1MSJ5 1256 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 PI16Q6UXB8 463 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 NECAB1Q8N987 351 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 STRBPQ96SI9 672 aaKnown RBP16.17■□□□□ 0.18
NINJ1-203ENST00000470314 GZF1Q9H116 711 aaPredicted RBP16.17■□□□□ 0.18
NINJ1-203ENST00000470314 MINPP1Q9UNW1 487 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 ZNF804BA4D1E1 1349 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 ZNF532Q9HCE3 1301 aa16.17■□□□□ 0.18
NINJ1-203ENST00000470314 LY75O60449 1722 aa16.16■□□□□ 0.18
NINJ1-203ENST00000470314 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
NINJ1-203ENST00000470314 RASGRF1Q13972 1273 aa16.16■□□□□ 0.18
NINJ1-203ENST00000470314 COL9A3Q14050 684 aaPredicted RBP16.16■□□□□ 0.18
NINJ1-203ENST00000470314 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
NINJ1-203ENST00000470314 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
NINJ1-203ENST00000470314 SCN7AQ01118 1682 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
NINJ1-203ENST00000470314 MCM5P33992 734 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 RFC4P35249 363 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 BCAMP50895 628 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 KCNQ4P56696 695 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 FGD1P98174 961 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 CAVIN4Q5BKX8 364 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 NCOA7Q8NI08 942 aa16.15■□□□□ 0.18
NINJ1-203ENST00000470314 PDS5AQ29RF7 1337 aaKnown RBP16.15■□□□□ 0.18
NINJ1-203ENST00000470314 TM4SF1P30408 202 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
NINJ1-203ENST00000470314 TTLL5Q6EMB2 1281 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 FBXO33Q7Z6M2 555 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 GPT2Q8TD30 523 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 BRF1Q92994 677 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 TCEANC2Q96MN5 208 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 SRP68Q9UHB9 627 aaKnown RBP16.14■□□□□ 0.17
NINJ1-203ENST00000470314 KIF3AQ9Y496 699 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 PNPLA7Q6ZV29 1317 aa16.14■□□□□ 0.17
NINJ1-203ENST00000470314 SBF2Q86WG5 1849 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.17
NINJ1-203ENST00000470314 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 USP48Q86UV5 1035 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
NINJ1-203ENST00000470314 AIDAQ96BJ3 306 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 MYH7P12883 1935 aa16.13■□□□□ 0.17
NINJ1-203ENST00000470314 PDIA3P30101 505 aaKnown RBP16.12■□□□□ 0.17
NINJ1-203ENST00000470314 TRDNQ13061 729 aa16.12■□□□□ 0.17
NINJ1-203ENST00000470314 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
NINJ1-203ENST00000470314 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
NINJ1-203ENST00000470314 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
NINJ1-203ENST00000470314 FAM84BQ96KN1 310 aaPredicted RBP16.12■□□□□ 0.17
NINJ1-203ENST00000470314 MTA3Q9BTC8 594 aa16.12■□□□□ 0.17
NINJ1-203ENST00000470314 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
NINJ1-203ENST00000470314 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 TAF1LQ8IZX4 1826 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 DHX16O60231 1041 aaKnown RBP16.11■□□□□ 0.17
NINJ1-203ENST00000470314 SCRN1Q12765 414 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 MAGEB6Q8N7X4 407 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
NINJ1-203ENST00000470314 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
NINJ1-203ENST00000470314 GRPEL1Q9HAV7 217 aa16.11■□□□□ 0.17
NINJ1-203ENST00000470314 SNAP23O00161 211 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 LETM1O95202 739 aaPredicted RBP16.1■□□□□ 0.17
NINJ1-203ENST00000470314 UBE2HP62256 183 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 ZSCAN23Q3MJ62 389 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
NINJ1-203ENST00000470314 KRT27Q7Z3Y8 459 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 RALYLQ86SE5 291 aaKnown RBP16.1■□□□□ 0.17
NINJ1-203ENST00000470314 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 LRP2BPQ9P2M1 347 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 CARMIL3Q8ND23 1372 aa16.1■□□□□ 0.17
NINJ1-203ENST00000470314 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 PRC1O43663 620 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 APPP05067 770 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 STK3Q13188 491 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 CAVIN1Q6NZI2 390 aaKnown RBP16.09■□□□□ 0.17
NINJ1-203ENST00000470314 GAS2L3Q86XJ1 694 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 TMEM87BQ96K49 555 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
NINJ1-203ENST00000470314 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
NINJ1-203ENST00000470314 GSG1L2A8MUP6 293 aa16.08■□□□□ 0.16
NINJ1-203ENST00000470314 NFIXQ14938 502 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms