RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 TRAK1Q9UPV9 953 aa9.62□□□□□ -0.87
XRN1-207ENST00000468894 ITPKAP23677 461 aa9.61□□□□□ -0.87
XRN1-207ENST00000468894 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
XRN1-207ENST00000468894 FOXD4L6Q3SYB3 417 aaPredicted RBP9.61□□□□□ -0.87
XRN1-207ENST00000468894 HGSNATQ68CP4 663 aa9.61□□□□□ -0.87
XRN1-207ENST00000468894 FOXD4L3Q6VB84 417 aaPredicted RBP9.61□□□□□ -0.87
XRN1-207ENST00000468894 CD163Q86VB7 1156 aa9.61□□□□□ -0.87
XRN1-207ENST00000468894 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
XRN1-207ENST00000468894 ZNF576Q9H609 170 aa9.61□□□□□ -0.87
XRN1-207ENST00000468894 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 PRPF40AO75400 957 aaKnown RBP9.6□□□□□ -0.87
XRN1-207ENST00000468894 ESRRAP11474 423 aaPredicted RBP9.6□□□□□ -0.87
XRN1-207ENST00000468894 ERCC3P19447 782 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 MFAP1P55081 439 aaKnown RBP9.6□□□□□ -0.87
XRN1-207ENST00000468894 IKBKEQ14164 716 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 FAM117BQ6P1L5 589 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 NXPE4Q6UWF7 544 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 WNT8BQ93098 351 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 RNF19AQ9NV58 838 aa9.6□□□□□ -0.87
XRN1-207ENST00000468894 C1QTNF9BB2RNN3 333 aa9.59□□□□□ -0.87
XRN1-207ENST00000468894 APBA3O96018 575 aa9.59□□□□□ -0.87
XRN1-207ENST00000468894 NACC1Q96RE7 527 aa9.59□□□□□ -0.87
XRN1-207ENST00000468894 CLEC4MQ9H2X3 399 aaPredicted RBP9.59□□□□□ -0.87
XRN1-207ENST00000468894 SEC31BQ9NQW1 1179 aa9.59□□□□□ -0.87
XRN1-207ENST00000468894 KCNK4Q9NYG8 393 aa9.59□□□□□ -0.87
XRN1-207ENST00000468894 SOX1O00570 391 aaPredicted RBP9.58□□□□□ -0.88
XRN1-207ENST00000468894 ADAM11O75078 769 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 PTPN12Q05209 780 aaKnown RBP9.58□□□□□ -0.88
XRN1-207ENST00000468894 PCDH1Q08174 1060 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 KLHL23Q8NBE8 558 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 LENG1Q96BZ8 264 aaPredicted RBP9.58□□□□□ -0.88
XRN1-207ENST00000468894 KLHDC7BQ96G42 594 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 OSBPL7Q9BZF2 842 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 OSGEPQ9NPF4 335 aa9.58□□□□□ -0.88
XRN1-207ENST00000468894 CD68P34810 354 aaPredicted RBP9.57□□□□□ -0.88
XRN1-207ENST00000468894 FCGRTP55899 365 aa9.57□□□□□ -0.88
XRN1-207ENST00000468894 TAGLNQ01995 201 aaKnown RBP9.57□□□□□ -0.88
XRN1-207ENST00000468894 IGF2-ASQ6U949 168 aa9.57□□□□□ -0.88
XRN1-207ENST00000468894 FOXD4L4Q8WXT5 416 aaPredicted RBP9.57□□□□□ -0.88
XRN1-207ENST00000468894 DUSP9Q99956 384 aaKnown RBP9.57□□□□□ -0.88
XRN1-207ENST00000468894 C9orf172C9J069 976 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 DDX3YO15523 660 aaKnown RBP9.56□□□□□ -0.88
XRN1-207ENST00000468894 WISP1O95388 367 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 GNA15P30679 374 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 C19orf57Q0VDD7 668 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 MBTPS1Q14703 1052 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 ZNF423Q2M1K9 1284 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 SOX17Q9H6I2 414 aaPredicted RBP9.56□□□□□ -0.88
XRN1-207ENST00000468894 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
XRN1-207ENST00000468894 B3GALT4O96024 378 aa9.55□□□□□ -0.88
XRN1-207ENST00000468894 ADGRE1Q14246 886 aa9.55□□□□□ -0.88
XRN1-207ENST00000468894 SUZ12Q15022 739 aaKnown RBP9.55□□□□□ -0.88
XRN1-207ENST00000468894 C3orf58Q8NDZ4 430 aa9.55□□□□□ -0.88
XRN1-207ENST00000468894 C12orf49Q9H741 205 aa9.55□□□□□ -0.88
XRN1-207ENST00000468894 USP21Q9UK80 565 aa9.55□□□□□ -0.88
XRN1-207ENST00000468894 PROCP04070 461 aa9.54□□□□□ -0.88
XRN1-207ENST00000468894 NLRP12P59046 1061 aa9.54□□□□□ -0.88
XRN1-207ENST00000468894 FAAP100Q0VG06 881 aa9.54□□□□□ -0.88
XRN1-207ENST00000468894 DTHD1Q6ZMT9 781 aa9.54□□□□□ -0.88
XRN1-207ENST00000468894 UBASH3BQ8TF42 649 aa9.54□□□□□ -0.88
XRN1-207ENST00000468894 SRCIN1Q9C0H9 1055 aa9.54□□□□□ -0.88
XRN1-207ENST00000468894 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
XRN1-207ENST00000468894 GIPC1O14908 333 aa9.53□□□□□ -0.88
XRN1-207ENST00000468894 ARL4DP49703 201 aa9.53□□□□□ -0.88
XRN1-207ENST00000468894 NRG1Q02297 640 aaPredicted RBP9.53□□□□□ -0.88
XRN1-207ENST00000468894 RPS26P11Q5JNZ5 115 aaPredicted RBP9.53□□□□□ -0.88
XRN1-207ENST00000468894 GPAT2Q6NUI2 795 aa9.53□□□□□ -0.88
XRN1-207ENST00000468894 NRSN2Q9GZP1 204 aa9.53□□□□□ -0.88
XRN1-207ENST00000468894 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.89
XRN1-207ENST00000468894 FGD1P98174 961 aa9.52□□□□□ -0.89
XRN1-207ENST00000468894 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.52□□□□□ -0.89
XRN1-207ENST00000468894 FRMD6Q96NE9 622 aa9.52□□□□□ -0.89
XRN1-207ENST00000468894 SPOCK3Q9BQ16 436 aa9.52□□□□□ -0.89
XRN1-207ENST00000468894 PARP2Q9UGN5 583 aa9.52□□□□□ -0.89
XRN1-207ENST00000468894 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
XRN1-207ENST00000468894 USP17L7P0C7H9 530 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 GSTT1P30711 240 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 GSTM4Q03013 218 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 ACAD11Q709F0 780 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 TXNRD3Q86VQ6 643 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
XRN1-207ENST00000468894 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 FAM8A1Q9UBU6 413 aa9.51□□□□□ -0.89
XRN1-207ENST00000468894 NOS3P29474 1203 aa9.5□□□□□ -0.89
XRN1-207ENST00000468894 KIAA1211Q6ZU35 1233 aa9.5□□□□□ -0.89
XRN1-207ENST00000468894 AGGF1Q8N302 714 aaeCLIP9.5□□□□□ -0.89
XRN1-207ENST00000468894 FAM161BQ96MY7 647 aa9.5□□□□□ -0.89
XRN1-207ENST00000468894 BCL2L13Q9BXK5 485 aa9.5□□□□□ -0.89
XRN1-207ENST00000468894 AKAP2Q9Y2D5 859 aa9.5□□□□□ -0.89
XRN1-207ENST00000468894 ALX3O95076 343 aa9.49□□□□□ -0.89
XRN1-207ENST00000468894 EIF4BP23588 611 aaKnown RBP9.49□□□□□ -0.89
XRN1-207ENST00000468894 ZNF157P51786 506 aaPredicted RBP9.49□□□□□ -0.89
XRN1-207ENST00000468894 DAB2P98082 770 aa9.49□□□□□ -0.89
XRN1-207ENST00000468894 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
XRN1-207ENST00000468894 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
XRN1-207ENST00000468894 GIPC2Q8TF65 315 aa9.49□□□□□ -0.89
XRN1-207ENST00000468894 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
XRN1-207ENST00000468894 LOC100289279A0A1B0GTE1 492 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms