RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
RBM39-226ENST00000468086 MAPK1P28482 360 aa8.42□□□□□ -1.06
RBM39-226ENST00000468086 NOS3P29474 1203 aa8.42□□□□□ -1.06
RBM39-226ENST00000468086 ORC1Q13415 861 aa8.42□□□□□ -1.06
RBM39-226ENST00000468086 GALNT11Q8NCW6 608 aa8.42□□□□□ -1.06
RBM39-226ENST00000468086 HHIPQ96QV1 700 aa8.42□□□□□ -1.06
RBM39-226ENST00000468086 HYAL3O43820 417 aaPredicted RBP8.41□□□□□ -1.06
RBM39-226ENST00000468086 ARL4DP49703 201 aa8.41□□□□□ -1.06
RBM39-226ENST00000468086 CCNJLQ8IV13 435 aa8.41□□□□□ -1.06
RBM39-226ENST00000468086 ZSCAN29Q8IWY8 852 aaPredicted RBP8.41□□□□□ -1.06
RBM39-226ENST00000468086 MEGF10Q96KG7 1140 aa8.41□□□□□ -1.06
RBM39-226ENST00000468086 CSRNP1Q96S65 589 aa8.41□□□□□ -1.06
RBM39-226ENST00000468086 SOX17Q9H6I2 414 aaPredicted RBP8.41□□□□□ -1.06
RBM39-226ENST00000468086 AKTIPQ9H8T0 292 aa8.41□□□□□ -1.06
RBM39-226ENST00000468086 LATS2Q9NRM7 1088 aa8.41□□□□□ -1.06
RBM39-226ENST00000468086 PLCB3Q01970 1234 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 DSC3Q14574 896 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 USPL1Q5W0Q7 1092 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 CCDC74AQ96AQ1 378 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 LIN7BQ9HAP6 207 aa8.4□□□□□ -1.06
RBM39-226ENST00000468086 KRTAP9-6A0A140TA67 174 aa8.39□□□□□ -1.07
RBM39-226ENST00000468086 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
RBM39-226ENST00000468086 TREHO43280 583 aa8.39□□□□□ -1.07
RBM39-226ENST00000468086 CDC25BP30305 580 aa8.39□□□□□ -1.07
RBM39-226ENST00000468086 C19orf57Q0VDD7 668 aa8.39□□□□□ -1.07
RBM39-226ENST00000468086 IKBKEQ14164 716 aa8.39□□□□□ -1.07
RBM39-226ENST00000468086 ASAP3Q8TDY4 903 aa8.39□□□□□ -1.07
RBM39-226ENST00000468086 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.38□□□□□ -1.07
RBM39-226ENST00000468086 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
RBM39-226ENST00000468086 ASB16Q96NS5 453 aa8.38□□□□□ -1.07
RBM39-226ENST00000468086 TCF12Q99081 682 aa8.38□□□□□ -1.07
RBM39-226ENST00000468086 EHD4Q9H223 541 aa8.38□□□□□ -1.07
RBM39-226ENST00000468086 A0A096LPE4 126 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 A0A1W2PPZ6 126 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
RBM39-226ENST00000468086 Q6ZS46 218 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
RBM39-226ENST00000468086 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 NPHS2Q9NP85 383 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
RBM39-226ENST00000468086 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
RBM39-226ENST00000468086 DUOXA2Q1HG44 320 aa8.36□□□□□ -1.07
RBM39-226ENST00000468086 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
RBM39-226ENST00000468086 PRR23CQ6ZRP0 262 aa8.36□□□□□ -1.07
RBM39-226ENST00000468086 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
RBM39-226ENST00000468086 PPP4R2Q9NY27 417 aa8.36□□□□□ -1.07
RBM39-226ENST00000468086 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
RBM39-226ENST00000468086 ITPKAP23677 461 aa8.35□□□□□ -1.07
RBM39-226ENST00000468086 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
RBM39-226ENST00000468086 CLEC4MQ9H2X3 399 aaPredicted RBP8.35□□□□□ -1.07
RBM39-226ENST00000468086 ZFYVE1Q9HBF4 777 aa8.35□□□□□ -1.07
RBM39-226ENST00000468086 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
RBM39-226ENST00000468086 KCNK4Q9NYG8 393 aa8.35□□□□□ -1.07
RBM39-226ENST00000468086 METTL12A8MUP2 240 aa8.34□□□□□ -1.07
RBM39-226ENST00000468086 ALX3O95076 343 aa8.34□□□□□ -1.07
RBM39-226ENST00000468086 GRIA4P48058 902 aa8.34□□□□□ -1.07
RBM39-226ENST00000468086 ENOX2Q16206 610 aaKnown RBP8.34□□□□□ -1.07
RBM39-226ENST00000468086 ACAD11Q709F0 780 aa8.34□□□□□ -1.07
RBM39-226ENST00000468086 FOXD4L4Q8WXT5 416 aaPredicted RBP8.34□□□□□ -1.07
RBM39-226ENST00000468086 CEP41Q9BYV8 373 aa8.34□□□□□ -1.07
RBM39-226ENST00000468086 MEGF11A6BM72 1044 aa8.33□□□□□ -1.08
RBM39-226ENST00000468086 ADAM11O75078 769 aa8.33□□□□□ -1.08
RBM39-226ENST00000468086 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
RBM39-226ENST00000468086 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
RBM39-226ENST00000468086 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
RBM39-226ENST00000468086 SND1Q7KZF4 910 aaKnown RBP eCLIP8.33□□□□□ -1.08
RBM39-226ENST00000468086 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
RBM39-226ENST00000468086 FBF1Q8TES7 1133 aa8.33□□□□□ -1.08
RBM39-226ENST00000468086 WISP1O95388 367 aa8.32□□□□□ -1.08
RBM39-226ENST00000468086 PCDH1Q08174 1060 aa8.32□□□□□ -1.08
RBM39-226ENST00000468086 SPRED3Q2MJR0 410 aa8.32□□□□□ -1.08
RBM39-226ENST00000468086 KIAA1211Q6ZU35 1233 aa8.32□□□□□ -1.08
RBM39-226ENST00000468086 EPS8L3Q8TE67 593 aaKnown RBP8.32□□□□□ -1.08
RBM39-226ENST00000468086 RNF208Q9H0X6 261 aa8.32□□□□□ -1.08
RBM39-226ENST00000468086 PNMA6FA0A0J9YX94 578 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 DDX3YO15523 660 aaKnown RBP8.31□□□□□ -1.08
RBM39-226ENST00000468086 XRCC5P13010 732 aaKnown RBP8.31□□□□□ -1.08
RBM39-226ENST00000468086 FSTP19883 344 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 NLRP12P59046 1061 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 GRM2Q14416 872 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 SLC51AQ86UW1 340 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 AGGF1Q8N302 714 aaeCLIP8.31□□□□□ -1.08
RBM39-226ENST00000468086 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 ABCB6Q9NP58 842 aa8.31□□□□□ -1.08
RBM39-226ENST00000468086 B3GALT4O96024 378 aa8.3□□□□□ -1.08
RBM39-226ENST00000468086 GLB1P16278 677 aa8.3□□□□□ -1.08
RBM39-226ENST00000468086 COL19A1Q14993 1142 aa8.3□□□□□ -1.08
RBM39-226ENST00000468086 ZNF423Q2M1K9 1284 aa8.3□□□□□ -1.08
RBM39-226ENST00000468086 ANKRD34AQ69YU3 496 aa8.3□□□□□ -1.08
RBM39-226ENST00000468086 GIPC1O14908 333 aa8.29□□□□□ -1.08
RBM39-226ENST00000468086 CYP11A1P05108 521 aa8.29□□□□□ -1.08
RBM39-226ENST00000468086 GSTM4Q03013 218 aa8.29□□□□□ -1.08
RBM39-226ENST00000468086 HP1BP3Q5SSJ5 553 aaPredicted RBP8.29□□□□□ -1.08
RBM39-226ENST00000468086 HGSNATQ68CP4 663 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms