RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CLEC10AQ8IUN9 316 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 TRIM42Q8IWZ5 723 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 FOXD3Q9UJU5 478 aaPredicted RBP8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 HMX2A2RU54 273 aa8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 MEGF11A6BM72 1044 aa8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 SOX1O00570 391 aaPredicted RBP8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 RNF43Q68DV7 783 aa8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 ZDHHC13Q8IUH4 622 aa8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 GJD3Q8N144 294 aa8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 RUSC1Q9BVN2 902 aa8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 BHLHE41Q9C0J9 482 aaPredicted RBP8.85□□□□□ -0.99
PRPF40A-205ENST00000467114 KIAA1324LA8MWY0 1029 aaPredicted RBP8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 COBLO75128 1261 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 MED26O95402 600 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 TGFB1P01137 390 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 PREPP48147 710 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 IKBKEQ14164 716 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 PEAR1Q5VY43 1037 aaPredicted RBP8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 FAM83CQ9BQN1 747 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 DBNDD2Q9BQY9 259 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 HIF3AQ9Y2N7 669 aa8.84□□□□□ -0.99
PRPF40A-205ENST00000467114 CARNS1A5YM72 827 aa8.83□□□□□ -1
PRPF40A-205ENST00000467114 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
PRPF40A-205ENST00000467114 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
PRPF40A-205ENST00000467114 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
PRPF40A-205ENST00000467114 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
PRPF40A-205ENST00000467114 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
PRPF40A-205ENST00000467114 BMP3P12645 472 aa8.82□□□□□ -1
PRPF40A-205ENST00000467114 FDX2Q6P4F2 183 aa8.82□□□□□ -1
PRPF40A-205ENST00000467114 ZFYVE28Q9HCC9 887 aa8.82□□□□□ -1
PRPF40A-205ENST00000467114 PRR19A6NJB7 356 aa8.81□□□□□ -1
PRPF40A-205ENST00000467114 ABL1P00519 1130 aa8.81□□□□□ -1
PRPF40A-205ENST00000467114 BEND4Q6ZU67 534 aa8.81□□□□□ -1
PRPF40A-205ENST00000467114 TMPRSS13Q9BYE2 586 aa8.81□□□□□ -1
PRPF40A-205ENST00000467114 LATS2Q9NRM7 1088 aa8.81□□□□□ -1
PRPF40A-205ENST00000467114 ESRRAP11474 423 aaPredicted RBP8.8□□□□□ -1
PRPF40A-205ENST00000467114 ZNF211Q13398 564 aaPredicted RBP8.8□□□□□ -1
PRPF40A-205ENST00000467114 INTS5Q6P9B9 1019 aaKnown RBP8.8□□□□□ -1
PRPF40A-205ENST00000467114 ASAP3Q8TDY4 903 aa8.8□□□□□ -1
PRPF40A-205ENST00000467114 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
PRPF40A-205ENST00000467114 SUGCTQ9HAC7 445 aa8.8□□□□□ -1
PRPF40A-205ENST00000467114 ANO2Q9NQ90 1003 aa8.8□□□□□ -1
PRPF40A-205ENST00000467114 EGFL7Q9UHF1 273 aa8.8□□□□□ -1
PRPF40A-205ENST00000467114 USTQ9Y2C2 406 aa8.8□□□□□ -1
PRPF40A-205ENST00000467114 LOC100289279A0A1B0GTE1 492 aa8.79□□□□□ -1
PRPF40A-205ENST00000467114 SMG8Q8ND04 991 aaKnown RBP8.79□□□□□ -1
PRPF40A-205ENST00000467114 TIAF1O95411 115 aa8.78□□□□□ -1
PRPF40A-205ENST00000467114 GRIK1P39086 918 aa8.78□□□□□ -1
PRPF40A-205ENST00000467114 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
PRPF40A-205ENST00000467114 GAS2O43903 313 aaKnown RBP8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 EIF4EBP3O60516 100 aaPredicted RBP8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 ICMTO60725 284 aa8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 DLGAP3O95886 979 aa8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 SPINK2P20155 84 aa8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 SHKBP1Q8TBC3 707 aa8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 USP26Q9BXU7 913 aa8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 CYP4F12Q9HCS2 524 aa8.77□□□□□ -1.01
PRPF40A-205ENST00000467114 MAP4P27816 1152 aaKnown RBP8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 ECM1Q16610 540 aa8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 EXOSC6Q5RKV6 272 aaKnown RBP8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 NRSN2Q9GZP1 204 aa8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 COL17A1Q9UMD9 1497 aaPredicted RBP8.76□□□□□ -1.01
PRPF40A-205ENST00000467114 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
PRPF40A-205ENST00000467114 POLR3DP05423 398 aaPredicted RBP8.75□□□□□ -1.01
PRPF40A-205ENST00000467114 SGO2Q562F6 1265 aa8.75□□□□□ -1.01
PRPF40A-205ENST00000467114 DTX1Q86Y01 620 aa8.75□□□□□ -1.01
PRPF40A-205ENST00000467114 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
PRPF40A-205ENST00000467114 C12orf50Q8NA57 414 aaPredicted RBP8.75□□□□□ -1.01
PRPF40A-205ENST00000467114 A0A096LPE4 126 aa8.74□□□□□ -1.01
PRPF40A-205ENST00000467114 A0A1W2PP55 124 aa8.74□□□□□ -1.01
PRPF40A-205ENST00000467114 A0A1W2PPZ6 126 aa8.74□□□□□ -1.01
PRPF40A-205ENST00000467114 GSTM4Q03013 218 aa8.74□□□□□ -1.01
PRPF40A-205ENST00000467114 TCF12Q99081 682 aa8.74□□□□□ -1.01
PRPF40A-205ENST00000467114 KRTAP4-12Q9BQ66 201 aa8.74□□□□□ -1.01
PRPF40A-205ENST00000467114 ADAMTS4O75173 837 aa8.73□□□□□ -1.01
PRPF40A-205ENST00000467114 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-205ENST00000467114 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
PRPF40A-205ENST00000467114 OAS3Q9Y6K5 1087 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-205ENST00000467114 WDR64B1ANS9 1081 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 GRIA4P48058 902 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 SERPINB4P48594 390 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 PCDH1Q08174 1060 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 MFSD14AQ96MC6 490 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 LIN7BQ9HAP6 207 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 BRPF3Q9ULD4 1205 aa8.72□□□□□ -1.01
PRPF40A-205ENST00000467114 H3BRB1 525 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 NEFLP07196 543 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 DRD2P14416 443 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 ZNF423Q2M1K9 1284 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 SPRED3Q2MJR0 410 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 GLYCTKQ8IVS8 523 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 C2CD4AQ8NCU7 369 aaPredicted RBP8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 ARID3AQ99856 593 aa8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 TUT1Q9H6E5 874 aaKnown RBP8.71□□□□□ -1.02
PRPF40A-205ENST00000467114 RXRBP28702 533 aa8.7□□□□□ -1.02
PRPF40A-205ENST00000467114 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms