RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 PDRG1Q9NUG6 133 aa25.24■■□□□ 1.63
PPP1R3F-203ENST00000466508 MYH13Q9UKX3 1938 aa25.24■■□□□ 1.63
PPP1R3F-203ENST00000466508 CYP21A2P08686 494 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 INTS4Q96HW7 963 aaKnown RBP25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 GNL3LQ9NVN8 582 aaKnown RBP25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 WTIPA6NIX2 430 aaPredicted RBP25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 RAB3GAP1Q15042 981 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 CAVIN4Q5BKX8 364 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 BLOC1S2Q6QNY1 142 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 ZGPATQ8N5A5 531 aaKnown RBP25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 FLAD1Q8NFF5 587 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 LIMCH1Q9UPQ0 1083 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 LAMA4Q16363 1823 aa25.23■■□□□ 1.63
PPP1R3F-203ENST00000466508 PDE6AP16499 860 aa25.22■■□□□ 1.63
PPP1R3F-203ENST00000466508 GYG1P46976 350 aa25.22■■□□□ 1.63
PPP1R3F-203ENST00000466508 GPAA1O43292 621 aa25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 MAP3K12Q12852 859 aa25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 COL23A1Q86Y22 540 aaPredicted RBP25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 WWC3Q9ULE0 1092 aa25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 ZNF532Q9HCE3 1301 aa25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 NRXN2Q9P2S2 1712 aa25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 TCRBV5S4A2TA0A5A2 114 aa25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 RPGRQ92834 1020 aaKnown RBP25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 ANO8Q9HCE9 1232 aaPredicted RBP25.21■■□□□ 1.63
PPP1R3F-203ENST00000466508 NLGN1Q8N2Q7 840 aa25.2■■□□□ 1.62
PPP1R3F-203ENST00000466508 FAM84BQ96KN1 310 aaPredicted RBP25.2■■□□□ 1.62
PPP1R3F-203ENST00000466508 FOXP2O15409 715 aa25.19■■□□□ 1.62
PPP1R3F-203ENST00000466508 RPS6KB1P23443 525 aa25.19■■□□□ 1.62
PPP1R3F-203ENST00000466508 VPS37DQ86XT2 251 aa25.19■■□□□ 1.62
PPP1R3F-203ENST00000466508 STK32BQ9NY57 414 aa25.19■■□□□ 1.62
PPP1R3F-203ENST00000466508 COL1A1P02452 1464 aaPredicted RBP25.19■■□□□ 1.62
PPP1R3F-203ENST00000466508 ANKRD31Q8N7Z5 1873 aa25.19■■□□□ 1.62
PPP1R3F-203ENST00000466508 COL9A3Q14050 684 aaPredicted RBP25.18■■□□□ 1.62
PPP1R3F-203ENST00000466508 FBXO33Q7Z6M2 555 aa25.18■■□□□ 1.62
PPP1R3F-203ENST00000466508 NEK1Q96PY6 1258 aa25.18■■□□□ 1.62
PPP1R3F-203ENST00000466508 ALDH8A1Q9H2A2 487 aaPredicted RBP25.18■■□□□ 1.62
PPP1R3F-203ENST00000466508 CTNNA3Q9UI47 895 aa25.18■■□□□ 1.62
PPP1R3F-203ENST00000466508 NUCB2P80303 420 aa25.17■■□□□ 1.62
PPP1R3F-203ENST00000466508 IQSEC3Q9UPP2 1182 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-203ENST00000466508 SEMA3EO15041 775 aa25.17■■□□□ 1.62
PPP1R3F-203ENST00000466508 MAGEB6Q8N7X4 407 aa25.17■■□□□ 1.62
PPP1R3F-203ENST00000466508 TNPO1Q92973 898 aaKnown RBP25.17■■□□□ 1.62
PPP1R3F-203ENST00000466508 KLRG2A4D1S0 409 aaPredicted RBP25.16■■□□□ 1.62
PPP1R3F-203ENST00000466508 KLRK1P26718 216 aa25.16■■□□□ 1.62
PPP1R3F-203ENST00000466508 ANKRD1Q15327 319 aa25.16■■□□□ 1.62
PPP1R3F-203ENST00000466508 SLC15A2Q16348 729 aa25.16■■□□□ 1.62
PPP1R3F-203ENST00000466508 DENND2AQ9ULE3 1009 aa25.16■■□□□ 1.62
PPP1R3F-203ENST00000466508 STOX1Q6ZVD7 989 aa25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 RBM17Q96I25 401 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 ZSCAN31Q96LW9 406 aaPredicted RBP25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 SH2B1Q9NRF2 756 aaPredicted RBP25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 PNPLA7Q6ZV29 1317 aa25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 HMGB1P09429 215 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 HOXA10P31260 410 aaPredicted RBP25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 LARP6Q9BRS8 491 aaKnown RBP25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 LRP2BPQ9P2M1 347 aa25.15■■□□□ 1.62
PPP1R3F-203ENST00000466508 XDHP47989 1333 aa25.14■■□□□ 1.62
PPP1R3F-203ENST00000466508 PDS5AQ29RF7 1337 aaKnown RBP25.14■■□□□ 1.62
PPP1R3F-203ENST00000466508 IRS2Q9Y4H2 1338 aa25.14■■□□□ 1.62
PPP1R3F-203ENST00000466508 FGAP02671 866 aa25.14■■□□□ 1.61
PPP1R3F-203ENST00000466508 ANKIB1Q9P2G1 1089 aa25.14■■□□□ 1.61
PPP1R3F-203ENST00000466508 LEMD3Q9Y2U8 911 aa25.14■■□□□ 1.61
PPP1R3F-203ENST00000466508 HIBADHP31937 336 aaKnown RBP25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 IMMTQ16891 758 aaKnown RBP25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 TTLL5Q6EMB2 1281 aa25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 AIDAQ96BJ3 306 aa25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 A0A0G2JLW4 131 aa25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 ZBTB22O15209 634 aa25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 TCEANC2Q96MN5 208 aa25.13■■□□□ 1.61
PPP1R3F-203ENST00000466508 CACNA1SQ13698 1873 aa25.12■■□□□ 1.61
PPP1R3F-203ENST00000466508 E7EWF7 191 aa25.12■■□□□ 1.61
PPP1R3F-203ENST00000466508 LARGE1O95461 756 aa25.12■■□□□ 1.61
PPP1R3F-203ENST00000466508 MCM4P33991 863 aa25.12■■□□□ 1.61
PPP1R3F-203ENST00000466508 STRBPQ96SI9 672 aaKnown RBP25.12■■□□□ 1.61
PPP1R3F-203ENST00000466508 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
PPP1R3F-203ENST00000466508 TOB2Q14106 344 aaPredicted RBP25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 CRAMP1Q96RY5 1269 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 TPCN1Q9ULQ1 816 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 QSER1Q2KHR3 1735 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 BBOX1O75936 387 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 PKP1Q13835 747 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 GBP4Q96PP9 640 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 BRIP1Q9BX63 1249 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 ABCF2Q9UG63 623 aa25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.11■■□□□ 1.61
PPP1R3F-203ENST00000466508 ME3Q16798 604 aa25.1■■□□□ 1.61
PPP1R3F-203ENST00000466508 SLC51AQ86UW1 340 aa25.1■■□□□ 1.61
PPP1R3F-203ENST00000466508 MBD4O95243 580 aa25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 DHX32Q7L7V1 743 aaKnown RBP25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 TXNRD3Q86VQ6 643 aa25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 ZMYM6O95789 1325 aa25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 MMP10P09238 476 aa25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 CLEC17AQ6ZS10 378 aa25.09■■□□□ 1.61
PPP1R3F-203ENST00000466508 RAI14Q9P0K7 980 aa25.08■■□□□ 1.61
PPP1R3F-203ENST00000466508 PARP3Q9Y6F1 533 aa25.08■■□□□ 1.61
PPP1R3F-203ENST00000466508 MAST2Q6P0Q8 1798 aa25.08■■□□□ 1.6
PPP1R3F-203ENST00000466508 CHD4Q14839 1912 aa25.07■■□□□ 1.6
PPP1R3F-203ENST00000466508 ZNF213O14771 459 aa25.07■■□□□ 1.6
PPP1R3F-203ENST00000466508 HAND2P61296 217 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms