RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SEMA3EO15041 775 aa20.57■□□□□ 0.88
EXOSC3-203ENST00000465229 TTC22Q5TAA0 569 aa20.57■□□□□ 0.88
EXOSC3-203ENST00000465229 DCAF8Q5TAQ9 597 aa20.57■□□□□ 0.88
EXOSC3-203ENST00000465229 HAUS7Q99871 368 aa20.57■□□□□ 0.88
EXOSC3-203ENST00000465229 FRAT2O75474 233 aaPredicted RBP20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 GSPT1P15170 499 aaKnown RBP20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 BMP2KLQ5H9B9 411 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 PODNQ7Z5L7 613 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 DENND2AQ9ULE3 1009 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 ECE2O60344 883 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 GRIN3BO60391 1043 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 ZAP70P43403 619 aa20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
EXOSC3-203ENST00000465229 MAP4K4O95819 1239 aaPredicted RBP20.55■□□□□ 0.88
EXOSC3-203ENST00000465229 EDC3Q96F86 508 aaKnown RBP20.55■□□□□ 0.88
EXOSC3-203ENST00000465229 DNAJC2Q99543 621 aaKnown RBP20.55■□□□□ 0.88
EXOSC3-203ENST00000465229 KCNQ5Q9NR82 932 aa20.55■□□□□ 0.88
EXOSC3-203ENST00000465229 LMNB1P20700 586 aa20.54■□□□□ 0.88
EXOSC3-203ENST00000465229 COL4A5P29400 1685 aa20.54■□□□□ 0.88
EXOSC3-203ENST00000465229 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
EXOSC3-203ENST00000465229 YDJCA8MPS7 323 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 SEC24BO95487 1268 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 JAG2Q9Y219 1238 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 GOLIM4O00461 696 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 GTF2IP78347 998 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 CHAF1AQ13111 956 aaPredicted RBP20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
EXOSC3-203ENST00000465229 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.88
EXOSC3-203ENST00000465229 TTLL5Q6EMB2 1281 aa20.52■□□□□ 0.88
EXOSC3-203ENST00000465229 TBC1D9Q6ZT07 1266 aa20.52■□□□□ 0.88
EXOSC3-203ENST00000465229 AKAP11Q9UKA4 1901 aa20.52■□□□□ 0.87
EXOSC3-203ENST00000465229 TRIM6-TRIM34B2RNG4 842 aa20.51■□□□□ 0.87
EXOSC3-203ENST00000465229 SDSP20132 328 aa20.51■□□□□ 0.87
EXOSC3-203ENST00000465229 WDR66Q8TBY9 1149 aa20.51■□□□□ 0.87
EXOSC3-203ENST00000465229 CHD4Q14839 1912 aa20.51■□□□□ 0.87
EXOSC3-203ENST00000465229 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
EXOSC3-203ENST00000465229 TBC1D32Q96NH3 1257 aa20.5■□□□□ 0.87
EXOSC3-203ENST00000465229 PIH1D3Q9NQM4 214 aaKnown RBP20.5■□□□□ 0.87
EXOSC3-203ENST00000465229 USP17L3A6NCW0 530 aa20.49■□□□□ 0.87
EXOSC3-203ENST00000465229 USP17L4A6NCW7 530 aa20.49■□□□□ 0.87
EXOSC3-203ENST00000465229 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
EXOSC3-203ENST00000465229 USP17L1Q7RTZ2 530 aa20.49■□□□□ 0.87
EXOSC3-203ENST00000465229 RILPL2Q969X0 211 aa20.49■□□□□ 0.87
EXOSC3-203ENST00000465229 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
EXOSC3-203ENST00000465229 SALL1Q9NSC2 1324 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 FZD9O00144 591 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 EIF5BO60841 1220 aaKnown RBP20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 RAD17O75943 681 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 KBTBD3Q8NAB2 608 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 FBXW7Q969H0 707 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 ABCF2Q9UG63 623 aa20.48■□□□□ 0.87
EXOSC3-203ENST00000465229 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 CXCL9Q07325 125 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 MFSD14BQ5SR56 506 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 CERS5Q8N5B7 392 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 TBC1D22AQ8WUA7 517 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 MXD3Q9BW11 206 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
EXOSC3-203ENST00000465229 GRIK5Q16478 980 aa20.46■□□□□ 0.87
EXOSC3-203ENST00000465229 PSMD14O00487 310 aa20.45■□□□□ 0.87
EXOSC3-203ENST00000465229 VIL1P09327 827 aaKnown RBP20.45■□□□□ 0.87
EXOSC3-203ENST00000465229 ZGPATQ8N5A5 531 aaKnown RBP20.45■□□□□ 0.87
EXOSC3-203ENST00000465229 LRP2BPQ9P2M1 347 aa20.45■□□□□ 0.87
EXOSC3-203ENST00000465229 SBF1O95248 1867 aa20.45■□□□□ 0.86
EXOSC3-203ENST00000465229 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
EXOSC3-203ENST00000465229 PRDX5P30044 214 aa20.45■□□□□ 0.86
EXOSC3-203ENST00000465229 FKBP1AP62942 108 aaKnown RBP20.45■□□□□ 0.86
EXOSC3-203ENST00000465229 CIAPIN1Q6FI81 312 aa20.45■□□□□ 0.86
EXOSC3-203ENST00000465229 FSD1Q9BTV5 496 aa20.45■□□□□ 0.86
EXOSC3-203ENST00000465229 CCDC88AQ3V6T2 1871 aa20.44■□□□□ 0.86
EXOSC3-203ENST00000465229 EIF6P56537 245 aaKnown RBP20.44■□□□□ 0.86
EXOSC3-203ENST00000465229 SPTY2D1Q68D10 685 aaPredicted RBP20.44■□□□□ 0.86
EXOSC3-203ENST00000465229 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
EXOSC3-203ENST00000465229 MAP3K12Q12852 859 aa20.43■□□□□ 0.86
EXOSC3-203ENST00000465229 RSBN1LQ6PCB5 846 aaPredicted RBP20.43■□□□□ 0.86
EXOSC3-203ENST00000465229 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
EXOSC3-203ENST00000465229 CHGBP05060 677 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 LDHBP07195 334 aaKnown RBP20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 TNIP1Q15025 636 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 SUGT1Q9Y2Z0 365 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 MYH13Q9UKX3 1938 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 SLC9C2Q5TAH2 1124 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 TICAM2Q86XR7 235 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 ZNF384Q8TF68 577 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 GMLQ99445 158 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 ZNF541Q9H0D2 1346 aa20.42■□□□□ 0.86
EXOSC3-203ENST00000465229 MECOMQ03112 1051 aa20.41■□□□□ 0.86
EXOSC3-203ENST00000465229 SLFNL1Q499Z3 407 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms