RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
HDAC6-213ENST00000462730 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
HDAC6-213ENST00000462730 GRAPQ13588 217 aa17.26■□□□□ 0.35
HDAC6-213ENST00000462730 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-213ENST00000462730 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
HDAC6-213ENST00000462730 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
HDAC6-213ENST00000462730 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-213ENST00000462730 APPBP2Q92624 585 aa17.26■□□□□ 0.35
HDAC6-213ENST00000462730 WTIPA6NIX2 430 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-213ENST00000462730 LARGE1O95461 756 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 CYP21A2P08686 494 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 BCAMP50895 628 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 ZSCAN25Q6NSZ9 544 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 RPGRQ92834 1020 aaKnown RBP17.25■□□□□ 0.35
HDAC6-213ENST00000462730 QSER1Q2KHR3 1735 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
HDAC6-213ENST00000462730 ZSCAN31Q96LW9 406 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-213ENST00000462730 SPATA5Q8NB90 893 aa17.24■□□□□ 0.35
HDAC6-213ENST00000462730 TCEANC2Q96MN5 208 aa17.24■□□□□ 0.35
HDAC6-213ENST00000462730 ZDHHC9Q9Y397 364 aa17.24■□□□□ 0.35
HDAC6-213ENST00000462730 IDH1O75874 414 aaKnown RBP17.23■□□□□ 0.35
HDAC6-213ENST00000462730 BAG4O95429 457 aaKnown RBP17.23■□□□□ 0.35
HDAC6-213ENST00000462730 ADD2P35612 726 aa17.23■□□□□ 0.35
HDAC6-213ENST00000462730 SLC15A2Q16348 729 aa17.23■□□□□ 0.35
HDAC6-213ENST00000462730 CLEC17AQ6ZS10 378 aa17.23■□□□□ 0.35
HDAC6-213ENST00000462730 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
HDAC6-213ENST00000462730 ANKRD2Q9GZV1 360 aa17.23■□□□□ 0.35
HDAC6-213ENST00000462730 SH2B1Q9NRF2 756 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-213ENST00000462730 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
HDAC6-213ENST00000462730 GYG1P46976 350 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 SLC51AQ86UW1 340 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
HDAC6-213ENST00000462730 ALDH8A1Q9H2A2 487 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-213ENST00000462730 MMP10P09238 476 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 SF3B2Q13435 895 aaKnown RBP17.22■□□□□ 0.35
HDAC6-213ENST00000462730 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
HDAC6-213ENST00000462730 GPAA1O43292 621 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 PDE6AP16499 860 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 KLRK1P26718 216 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 BAG6P46379 1132 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 WWC3Q9ULE0 1092 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 TPCN1Q9ULQ1 816 aa17.21■□□□□ 0.35
HDAC6-213ENST00000462730 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-213ENST00000462730 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-213ENST00000462730 A0A0G2JLW4 131 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 TRAK2O60296 914 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 TOB2Q14106 344 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 ME3Q16798 604 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 MYH13Q9UKX3 1938 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 COL11A2P13942 1736 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 ZNF532Q9HCE3 1301 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 FOXP2O15409 715 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 BRD1O95696 1058 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 PTMSP20962 102 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-213ENST00000462730 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 PARP3Q9Y6F1 533 aa17.2■□□□□ 0.34
HDAC6-213ENST00000462730 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 FAM84BQ96KN1 310 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-213ENST00000462730 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 LRRC37AA6NMS7 1700 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 NECAB1Q8N987 351 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
HDAC6-213ENST00000462730 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
HDAC6-213ENST00000462730 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
HDAC6-213ENST00000462730 E7EWF7 191 aa17.18■□□□□ 0.34
HDAC6-213ENST00000462730 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
HDAC6-213ENST00000462730 MAP3K12Q12852 859 aa17.18■□□□□ 0.34
HDAC6-213ENST00000462730 XDHP47989 1333 aa17.18■□□□□ 0.34
HDAC6-213ENST00000462730 LAMA4Q16363 1823 aa17.17■□□□□ 0.34
HDAC6-213ENST00000462730 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
HDAC6-213ENST00000462730 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
HDAC6-213ENST00000462730 MCTP1Q6DN14 999 aa17.17■□□□□ 0.34
HDAC6-213ENST00000462730 Q6ZUG5 572 aa17.17■□□□□ 0.34
HDAC6-213ENST00000462730 PKNOX2Q96KN3 472 aa17.17■□□□□ 0.34
HDAC6-213ENST00000462730 IMMTQ16891 758 aaKnown RBP17.17■□□□□ 0.34
HDAC6-213ENST00000462730 MAGEB6Q8N7X4 407 aa17.17■□□□□ 0.34
HDAC6-213ENST00000462730 GZF1Q9H116 711 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-213ENST00000462730 IRS2Q9Y4H2 1338 aa17.16■□□□□ 0.34
HDAC6-213ENST00000462730 FGAP02671 866 aa17.16■□□□□ 0.34
HDAC6-213ENST00000462730 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms