RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 MTHFSDQ2M296 383 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 SH3D19Q5HYK7 790 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 OTOP1Q7RTM1 612 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 RTFDC1Q9BY42 306 aaPredicted RBP7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 ATP6V0A2Q9Y487 856 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 CENPFP49454 3210 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 TBC1D12O60347 775 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 NEFLP07196 543 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 IL13P35225 146 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 FKBP1BP68106 108 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 KIAA2012Q0VF49 1180 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 TEFQ10587 303 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 DPP8Q6V1X1 898 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 MOB2Q70IA6 237 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 PLPP6Q8IY26 295 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 MPNDQ8N594 471 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 MRPL50Q8N5N7 158 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 OXER1Q8TDS5 423 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 ARMC5Q96C12 935 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 CFHR5Q9BXR6 569 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 NYXQ9GZU5 481 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 NUDCQ9Y266 331 aa7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 COL3A1P02461 1466 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-204ENST00000462198 RANBP2P49792 3224 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 PSMD14O00487 310 aa7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 U2SURPO15042 1029 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 KCNQ3O43525 872 aa7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 IL17REQ8NFR9 667 aa7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 DPF3Q92784 378 aa7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 ZBED2Q9BTP6 218 aa7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 REPIN1Q9BWE0 567 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-204ENST00000462198 ABCC12Q96J65 1359 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 HMOX1P09601 288 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 SREBF2Q12772 1141 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 PTGDRQ13258 359 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 SLC4A8Q2Y0W8 1093 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 TRAF7Q6Q0C0 670 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 SP8Q8IXZ3 490 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 TMUB1Q9BVT8 246 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 GGA3Q9NZ52 723 aa7.77□□□□□ -1.17
SMARCC1-204ENST00000462198 HTTP42858 3142 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 DLG5Q8TDM6 1919 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 WTIPA6NIX2 430 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 NBPF26B4DH59 902 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 SOX1O00570 391 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 BBOX1O75936 387 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 ALDH1A1P00352 501 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 U2AF1L5P0DN76 240 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 U2AF1Q01081 240 aaKnown RBP eCLIP7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 KIF4BQ2VIQ3 1234 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 NBPF10Q6P3W6 841 aaKnown RBP7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 ERO1AQ96HE7 468 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 LRCH3Q96II8 777 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 PRO3102Q9H379 93 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 KCNQ5Q9NR82 932 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 BRCA2P51587 3418 aa7.76□□□□□ -1.17
SMARCC1-204ENST00000462198 BTBD11A6QL63 1104 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 RPS12P25398 132 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 MAP3K9P80192 1104 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 SCARF1Q14162 830 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 GLIPR1L2Q4G1C9 344 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 ANGEL2Q5VTE6 544 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 PRAMEF18Q5VWM3 479 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 SUSD4Q5VX71 490 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 NBPF11Q86T75 865 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 CD99L2Q8TCZ2 262 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 ZNF333Q96JL9 665 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 NBPF3Q9H094 633 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 EFCC1Q9HA90 598 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 NUP98P52948 1817 aa7.75□□□□□ -1.17
SMARCC1-204ENST00000462198 MYCP01106 439 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 SNRPA1P09661 255 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 GPTP24298 496 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 INHBEP58166 350 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 WDR43Q15061 677 aaKnown RBP eCLIP7.74□□□□□ -1.172e-6■□□□□ 11.2
SMARCC1-204ENST00000462198 WASHC4Q2M389 1173 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 ZNF454Q8N9F8 522 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 DBNDD1Q9H9R9 158 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 MRS2Q9HD23 443 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 PRDM6Q9NQX0 595 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 SCAF8Q9UPN6 1271 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 RIC1Q4ADV7 1423 aa7.74□□□□□ -1.17
SMARCC1-204ENST00000462198 UNC80Q8N2C7 3258 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 ERVV-1B6SEH8 477 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 NEFMP07197 916 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 PTPREP23469 700 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 PRKAR2BP31323 418 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 PTPN12Q05209 780 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 TCIRG1Q13488 830 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 SKIV2LQ15477 1246 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 CCDC184Q52MB2 194 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 DEFB123Q8N688 67 aa7.73□□□□□ -1.17
SMARCC1-204ENST00000462198 PNNQ9H307 717 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms