RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GNAT2P19087 354 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 CNPY2Q9Y2B0 182 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 A0A1B0GUL7 405 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 CLCN1P35523 988 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 IFNL2Q8IZJ0 200 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 DNAJC25Q9H1X3 360 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 HSPA1LP34931 641 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 TRPC3Q13507 836 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 TSNAXIP1Q2TAA8 658 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 NBPF6Q5VWK0 638 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 NBPF4Q96M43 638 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 TBC1D32Q96NH3 1257 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 ZKSCAN5Q9Y2L8 839 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 E7EVH7 732 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 STK10O94804 968 aaKnown RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 F13A1P00488 732 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 SLC8A3P57103 927 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 MCMDC2Q4G0Z9 681 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 PLCD3Q8N3E9 789 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 HAUS7Q99871 368 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 RASSF4Q9H2L5 321 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 NSD2O96028 1365 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 VIMP08670 466 aaKnown RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 RFC1P35251 1148 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 PCK1P35558 622 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 POTEDQ86YR6 584 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 ZNF622Q969S3 477 aaKnown RBP eCLIP10.11□□□□□ -0.795e-8■■■□□ 17.3
BRCA1-205ENST00000461221 DACT1Q9NYF0 836 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 CFTRP13569 1480 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 GIPC1O14908 333 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 TRIM27P14373 513 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 TRIM14Q14142 442 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 GKAP1Q5VSY0 366 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 TBC1D31Q96DN5 1066 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 CCDC94Q9BW85 323 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 AGTPBP1Q9UPW5 1226 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 GNA11P29992 359 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 RFC4P35249 363 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 TERF1P54274 439 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 HS1BP3Q53T59 392 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 WDR44Q5JSH3 913 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 SH2D4BQ5SQS7 431 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 USHBP1Q8N6Y0 703 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 GBP7Q8N8V2 638 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 CACYBPQ9HB71 228 aaKnown RBP10.11□□□□□ -0.79
BRCA1-205ENST00000461221 STX10O60499 249 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 HSP90AA4PQ58FG1 418 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 TAOK1Q7L7X3 1001 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 SRGAP1Q7Z6B7 1085 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 KIFC2Q96AC6 838 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 OGFRQ9NZT2 677 aa10.11□□□□□ -0.79
BRCA1-205ENST00000461221 RHOXF2BP0C7M4 288 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 PLCG2P16885 1265 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 NAA16Q6N069 864 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 UBE3BQ7Z3V4 1068 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 SDCCAG8Q86SQ7 713 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 NECAB1Q8N987 351 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 RHPN1Q8TCX5 695 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 ZNF830Q96NB3 372 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 RHOXF2Q9BQY4 288 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 FRMD4BQ9Y2L6 1034 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 ITIH3Q06033 890 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 KARSQ15046 597 aaKnown RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 UAP1Q16222 522 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 RILPL1Q5EBL4 403 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 Q6ZUG5 572 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 BRAPQ7Z569 592 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 ZNF804AQ7Z570 1209 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 PHLDB2Q86SQ0 1253 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 LEO1Q8WVC0 666 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 IL16Q14005 1332 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 NAIPQ13075 1403 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 MARCKSP29966 332 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 MCM7P33993 719 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 TYRO3Q06418 890 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 RASA3Q14644 834 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 SLC4A8Q2Y0W8 1093 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 CCDC65Q8IXS2 484 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 C10orf67Q8IYJ2 551 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 NCAPGQ9BPX3 1015 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 LIN9Q5TKA1 542 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 LZTFL1Q9NQ48 299 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 HAUS2Q9NVX0 235 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
BRCA1-205ENST00000461221 RBM8AQ9Y5S9 174 aaKnown RBP10.1□□□□□ -0.79
BRCA1-205ENST00000461221 STMN1P16949 149 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-205ENST00000461221 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
BRCA1-205ENST00000461221 LMOD1P29536 600 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-205ENST00000461221 ATP2B3Q16720 1220 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms