RNA–Protein interactions for RNA: ENST00000460837.2

PTCD2-203, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-203ENST00000460837 CCDC9Q9Y3X0 531 aaKnown RBP9.55□□□□□ -0.88
PTCD2-203ENST00000460837 GIGYF1O75420 1035 aaPredicted RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 RNF144AP50876 292 aaPredicted RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 RBM6P78332 1123 aaKnown RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 SRSF11Q05519 484 aaKnown RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 MTHFSDQ2M296 383 aaKnown RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 RGS17Q9UGC6 210 aaPredicted RBP9.54□□□□□ -0.88
PTCD2-203ENST00000460837 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
PTCD2-203ENST00000460837 PCDHB9Q9Y5E1 797 aa9.54□□□□□ -0.88
PTCD2-203ENST00000460837 TOGARAM1Q9Y4F4 1720 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 MEN1O00255 615 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 APAF1O14727 1248 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
PTCD2-203ENST00000460837 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
PTCD2-203ENST00000460837 MAP3K10Q02779 954 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 GAS6Q14393 721 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
PTCD2-203ENST00000460837 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
PTCD2-203ENST00000460837 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 PCDH11XQ9BZA7 1347 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 PCDH11YQ9BZA8 1340 aa9.53□□□□□ -0.88
PTCD2-203ENST00000460837 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.88
PTCD2-203ENST00000460837 ZBBXA8MT70 800 aa9.52□□□□□ -0.89
PTCD2-203ENST00000460837 EXOC5O00471 708 aa9.52□□□□□ -0.89
PTCD2-203ENST00000460837 DDB1Q16531 1140 aa9.52□□□□□ -0.89
PTCD2-203ENST00000460837 GPAT2Q6NUI2 795 aa9.52□□□□□ -0.89
PTCD2-203ENST00000460837 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
PTCD2-203ENST00000460837 GZF1Q9H116 711 aaPredicted RBP9.52□□□□□ -0.89
PTCD2-203ENST00000460837 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 KDM3BQ7LBC6 1761 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 GNAT3A8MTJ3 354 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 CYP27B1O15528 508 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 CELA2BP08218 269 aaPredicted RBP9.51□□□□□ -0.89
PTCD2-203ENST00000460837 PHKG2P15735 406 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 RIPK4P57078 832 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 LMOD3Q0VAK6 560 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 AKAP4Q5JQC9 854 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
PTCD2-203ENST00000460837 RIPOR1Q6ZS17 1223 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 IFNL2Q8IZJ0 200 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 DNMT3AQ9Y6K1 912 aaPredicted RBP9.51□□□□□ -0.89
PTCD2-203ENST00000460837 MRC1P22897 1456 aa9.51□□□□□ -0.89
PTCD2-203ENST00000460837 BCL9O00512 1426 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 GPR25O00155 361 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
PTCD2-203ENST00000460837 RXRBP28702 533 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTCD2-203ENST00000460837 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 ZBED9Q6R2W3 1325 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 ZNF521Q96K83 1311 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
PTCD2-203ENST00000460837 PAPPAQ13219 1627 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 KDM6AO15550 1401 aaPredicted RBP9.49□□□□□ -0.89
PTCD2-203ENST00000460837 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 FBXO45P0C2W1 286 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 DBN1Q16643 649 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 FOXR1Q6PIV2 292 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 TRIM22Q8IYM9 498 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
PTCD2-203ENST00000460837 ENAMQ9NRM1 1142 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 RRP7AQ9Y3A4 280 aaKnown RBP9.49□□□□□ -0.89
PTCD2-203ENST00000460837 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
PTCD2-203ENST00000460837 UBR2Q8IWV8 1755 aa9.49□□□□□ -0.89
PTCD2-203ENST00000460837 RGS12O14924 1447 aa9.48□□□□□ -0.89
PTCD2-203ENST00000460837 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
PTCD2-203ENST00000460837 GPC1P35052 558 aa9.48□□□□□ -0.89
PTCD2-203ENST00000460837 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
PTCD2-203ENST00000460837 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
PTCD2-203ENST00000460837 GMCL1Q96IK5 515 aa9.48□□□□□ -0.89
PTCD2-203ENST00000460837 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
PTCD2-203ENST00000460837 GAS2L1Q99501 681 aaPredicted RBP9.48□□□□□ -0.89
PTCD2-203ENST00000460837 BTAF1O14981 1849 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 SOX11P35716 441 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
PTCD2-203ENST00000460837 POU4F2Q12837 409 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 PDE3BQ13370 1112 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 SLC27A3Q5K4L6 730 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 CC2D2BQ6DHV5 1058 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 WDR63Q8IWG1 891 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 MARCH10Q8NA82 808 aaPredicted RBP9.47□□□□□ -0.89
PTCD2-203ENST00000460837 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 DDX54Q8TDD1 881 aaKnown RBP9.47□□□□□ -0.89
PTCD2-203ENST00000460837 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 MBIPQ9NS73 344 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 IL16Q14005 1332 aa9.47□□□□□ -0.89
PTCD2-203ENST00000460837 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.9
PTCD2-203ENST00000460837 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
PTCD2-203ENST00000460837 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
PTCD2-203ENST00000460837 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.9
PTCD2-203ENST00000460837 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
PTCD2-203ENST00000460837 DYRK1BQ9Y463 629 aa9.46□□□□□ -0.9
PTCD2-203ENST00000460837 CACNA1FO60840 1977 aa9.46□□□□□ -0.9
PTCD2-203ENST00000460837 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms