RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TXNRD3Q86VQ6 643 aa14.99□□□□□ -0.01
HDAC4-206ENST00000460235 EVI5LQ96CN4 794 aa14.99□□□□□ -0.01
HDAC4-206ENST00000460235 DBNDD1Q9H9R9 158 aa14.99□□□□□ -0.01
HDAC4-206ENST00000460235 TLR7Q9NYK1 1049 aaKnown RBP14.99□□□□□ -0.01
HDAC4-206ENST00000460235 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
HDAC4-206ENST00000460235 FER1L6Q2WGJ9 1857 aa14.99□□□□□ -0.01
HDAC4-206ENST00000460235 IRS2Q9Y4H2 1338 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 LTBP1Q14766 1721 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 HIP1O00291 1037 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 RGS3P49796 1198 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 RASSF7Q02833 373 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 MAP3K12Q12852 859 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 CIAPIN1Q6FI81 312 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 FBXW7Q969H0 707 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 GPR101Q96P66 508 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-206ENST00000460235 BOLA2Q9H3K6 86 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 PAG1Q9NWQ8 432 aa14.98□□□□□ -0.01
HDAC4-206ENST00000460235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-206ENST00000460235 SALL3Q9BXA9 1300 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 SALL1Q9NSC2 1324 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 TRIM6-TRIM34B2RNG4 842 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 RPS12P25398 132 aaKnown RBP14.97□□□□□ -0.01
HDAC4-206ENST00000460235 KLRK1P26718 216 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 GTF2IP78347 998 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 GSTO1P78417 241 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-206ENST00000460235 RASGRF1Q13972 1273 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 DNAJC2Q99543 621 aaKnown RBP14.97□□□□□ -0.01
HDAC4-206ENST00000460235 HMG20BQ9P0W2 317 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 HDAC9Q9UKV0 1011 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 DUOX1Q9NRD9 1551 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 ARAP2Q8WZ64 1704 aa14.97□□□□□ -0.01
HDAC4-206ENST00000460235 A0A1B0GUL6 1792 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 WTIPA6NIX2 430 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-206ENST00000460235 FZD9O00144 591 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 LDHBP07195 334 aaKnown RBP14.96□□□□□ -0.01
HDAC4-206ENST00000460235 LDHCP07864 332 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 ZFYP08048 801 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-206ENST00000460235 MCAMP43121 646 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 BMP2KLQ5H9B9 411 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 MFSD14BQ5SR56 506 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 TTC22Q5TAA0 569 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 AGBL3Q8NEM8 1001 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 PI4K2BQ8TCG2 481 aa14.96□□□□□ -0.01
HDAC4-206ENST00000460235 PDE4AP27815 886 aa14.95□□□□□ -0.02
HDAC4-206ENST00000460235 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
HDAC4-206ENST00000460235 OTUD7AQ8TE49 926 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-206ENST00000460235 NOL10Q9BSC4 688 aaKnown RBP14.95□□□□□ -0.02
HDAC4-206ENST00000460235 ABCF2Q9UG63 623 aa14.95□□□□□ -0.02
HDAC4-206ENST00000460235 IQSEC3Q9UPP2 1182 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-206ENST00000460235 GOLIM4O00461 696 aa14.94□□□□□ -0.02
HDAC4-206ENST00000460235 VIL1P09327 827 aaKnown RBP14.94□□□□□ -0.02
HDAC4-206ENST00000460235 ZAP70P43403 619 aa14.94□□□□□ -0.02
HDAC4-206ENST00000460235 DZIP1Q86YF9 867 aaKnown RBP14.94□□□□□ -0.02
HDAC4-206ENST00000460235 GPC2Q8N158 579 aa14.94□□□□□ -0.02
HDAC4-206ENST00000460235 RILPL2Q969X0 211 aa14.94□□□□□ -0.02
HDAC4-206ENST00000460235 SNRKQ9NRH2 765 aa14.94□□□□□ -0.02
HDAC4-206ENST00000460235 IDH1O75874 414 aaKnown RBP14.93□□□□□ -0.02
HDAC4-206ENST00000460235 HDLBPQ00341 1268 aaKnown RBP14.93□□□□□ -0.02
HDAC4-206ENST00000460235 CXCL9Q07325 125 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-206ENST00000460235 SLC51AQ86UW1 340 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 KBTBD3Q8NAB2 608 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 DPF2Q92785 391 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 FSD1Q9BTV5 496 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 MRIQ9BWK5 157 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 RAI14Q9P0K7 980 aa14.93□□□□□ -0.02
HDAC4-206ENST00000460235 CHD4Q14839 1912 aa14.92□□□□□ -0.02
HDAC4-206ENST00000460235 RAD17O75943 681 aa14.92□□□□□ -0.02
HDAC4-206ENST00000460235 CYP2E1P05181 493 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-206ENST00000460235 LMOD1P29536 600 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-206ENST00000460235 DACT2Q5SW24 774 aa14.92□□□□□ -0.02
HDAC4-206ENST00000460235 RFX7Q2KHR2 1363 aa14.92□□□□□ -0.02
HDAC4-206ENST00000460235 YDJCA8MPS7 323 aa14.91□□□□□ -0.02
HDAC4-206ENST00000460235 H7C1D1 291 aa14.91□□□□□ -0.02
HDAC4-206ENST00000460235 PSMD14O00487 310 aa14.91□□□□□ -0.02
HDAC4-206ENST00000460235 MFAP1P55081 439 aaKnown RBP14.91□□□□□ -0.02
HDAC4-206ENST00000460235 SCARF1Q14162 830 aa14.91□□□□□ -0.02
HDAC4-206ENST00000460235 TSHZ3Q63HK5 1081 aa14.91□□□□□ -0.02
HDAC4-206ENST00000460235 GJA3Q9Y6H8 435 aa14.91□□□□□ -0.02
HDAC4-206ENST00000460235 BAG3O95817 575 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 MAP4K4O95819 1239 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-206ENST00000460235 USP17L8P0C7I0 530 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 PLCG2P16885 1265 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 UBE3CQ15386 1083 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 SLC9C2Q5TAH2 1124 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 NAA16Q6N069 864 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-206ENST00000460235 TEKT1Q969V4 418 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 DIAPH3Q9NSV4 1193 aa14.9□□□□□ -0.02
HDAC4-206ENST00000460235 TTF2Q9UNY4 1162 aaKnown RBP14.9□□□□□ -0.02
HDAC4-206ENST00000460235 IQCA1LA6NCM1 817 aa14.89□□□□□ -0.03
HDAC4-206ENST00000460235 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
HDAC4-206ENST00000460235 SDSP20132 328 aa14.89□□□□□ -0.03
HDAC4-206ENST00000460235 SERPINA10Q9UK55 444 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms