RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TCHPQ9BT92 498 aa10.01□□□□□ -0.81
SHROOM4-203ENST00000460112 RBM26Q5T8P6 1007 aaKnown RBP10.01□□□□□ -0.81
SHROOM4-203ENST00000460112 NEK11Q8NG66 645 aa10.01□□□□□ -0.81
SHROOM4-203ENST00000460112 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 CALCOCO2Q13137 446 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 MPRIPQ6WCQ1 1025 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 NPC1L1Q9UHC9 1359 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 PPP1R7Q15435 360 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10□□□□□ -0.81
SHROOM4-203ENST00000460112 CASQ2O14958 399 aaPredicted RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 ORC3Q9UBD5 711 aaPredicted RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 ZNF165P49910 485 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 NAPAP54920 295 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 UBASH3AP57075 661 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 PTCD1O75127 700 aaKnown RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 WDR44Q5JSH3 913 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 AFAP1Q8N556 730 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 PFDN4Q9NQP4 134 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 GIPC1O14908 333 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 ZBTB43O43298 467 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 SMTNP53814 917 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 ASIC1P78348 528 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 LACTBP83111 547 aaPredicted RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 XPCQ01831 940 aaPredicted RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 SPATS2Q86XZ4 545 aaKnown RBP10□□□□□ -0.81
SHROOM4-203ENST00000460112 IFNL2Q8IZJ0 200 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 PPFIBP2Q8ND30 876 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 NGLY1Q96IV0 654 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 HAUS7Q99871 368 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 MYO5CQ9NQX4 1742 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 POLD1P28340 1107 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 ZKSCAN5Q9Y2L8 839 aa10□□□□□ -0.81
SHROOM4-203ENST00000460112 ADCY5O95622 1261 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 CFAP74Q9C0B2 1584 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 HEATR3Q7Z4Q2 680 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 NKIRAS1Q9NYS0 192 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 SERPINA10Q9UK55 444 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 KIF11P52732 1056 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 GABPB1Q06547 395 aaPredicted RBP9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 CUL4BQ13620 913 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 VPS52Q8N1B4 723 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 DKC1O60832 514 aaKnown RBP eCLIP9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 EYA3Q99504 573 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 EXOC7Q9UPT5 735 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 STX10O60499 249 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 LIN9Q5TKA1 542 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 CACNA2D3Q8IZS8 1091 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 NOX5Q96PH1 765 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 DNMT1P26358 1616 aaKnown RBP9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 LPXNO60711 386 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 KRT2P35908 639 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 RARSP54136 660 aaKnown RBP9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 KMT5BQ4FZB7 885 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 KRT79Q5XKE5 535 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 RPGRIP1Q96KN7 1286 aa9.99□□□□□ -0.81
SHROOM4-203ENST00000460112 SNRPA1P09661 255 aaKnown RBP9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 PLCB3Q01970 1234 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ZFP91Q96JP5 570 aaPredicted RBP9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 EBAG9O00559 213 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 CCDC26Q8TAB7 109 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ZNF830Q96NB3 372 aaPredicted RBP9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 MMRN2Q9H8L6 949 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 E7EVH7 732 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ATP11AP98196 1134 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 TRIM14Q14142 442 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 LDHAL6AQ6ZMR3 332 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 CEP57Q86XR8 500 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 MRPS27Q92552 414 aaKnown RBP9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ANKRD2Q9GZV1 360 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 BCAP29Q9UHQ4 241 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 GOLGA6CA6NDK9 693 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 GOLGA6DP0CG33 693 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 STMN1P16949 149 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 SATB1Q01826 763 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 PPP2R5EQ16537 467 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 GSDMBQ8TAX9 411 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 KIFC2Q96AC6 838 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 GOLGA6AQ9NYA3 693 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 MAP3K2Q9Y2U5 619 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 RFX1P22670 979 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 MSH6P52701 1360 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ZC3H6P61129 1189 aaKnown RBP9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 UBL4BQ8N7F7 174 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 FLIIQ13045 1269 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 MCM10Q7L590 875 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ARHGAP24Q8N264 748 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 SETDB2Q96T68 719 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 VAT1LQ9HCJ6 419 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 ADGRL1O94910 1474 aa9.98□□□□□ -0.81
SHROOM4-203ENST00000460112 GBP1P32455 592 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms