RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173	ANKRD18B	A2A2Z9	1011 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	KIF3C	O14782	793 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	DDX46	Q7L014	1031 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PTPDC1	A2A3K4	754 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TNNC1	P63316	161 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	IFT88	Q13099	833 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PDE1C	Q14123	709 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	IFI16	Q16666	785 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RGS22	Q8NE09	1264 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	NCAPG	Q9BPX3	1015 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CETN3	O15182	167 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ATP8B1	O43520	1251 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CREB3L3	Q68CJ9	461 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CDC37L1	Q7L3B6	337 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	VSIG1	Q86XK7	387 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ZCCHC17	Q9NP64	241 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PPP1R12B	O60237	982 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	UBA7	P41226	1012 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	GRIPAP1	Q4V328	841 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CHST3	Q7LGC8	479 aa		13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RNF10	Q8N5U6	811 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-208	ENST00000456173	MINDY4B	A8MYZ0	360 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TRIM66	O15016	1216 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PFDN1	O60925	122 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CEP85	Q6P2H3	762 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TEX2	Q8IWB9	1127 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PPP1R13B	Q96KQ4	1090 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	DAPK1	P53355	1430 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	NLRP5	P59047	1200 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	APOBR	Q0VD83	1088 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ARHGEF2	Q92974	986 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	DMRT2	Q9Y5R5	561 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	MRFAP1	Q9Y605	127 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RAPGEF3	O95398	923 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PPP1R14C	Q8TAE6	165 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SPAG5	Q96R06	1193 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SLF1	Q9BQI6	1058 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	VPS16	Q9H269	839 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ADAM21	Q9UKJ8	722 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PPP2R2C	Q9Y2T4	447 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	IL16	Q14005	1332 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	KMT5B	Q4FZB7	885 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RABGGTA	Q92696	567 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RASAL2	Q9UJF2	1139 aa		13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RNF40	O75150	1001 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TADA2B	Q86TJ2	420 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CCDC77	Q9BR77	488 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	NAPB	Q9H115	298 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SYNJ2	O15056	1496 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	KIAA0586	Q9BVV6	1533 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	NR1I2	O75469	434 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RFC1	P35251	1148 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	DBN1	Q16643	649 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ZNF365	Q70YC5	407 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	IFT20	Q8IY31	132 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RAB3IL1	Q8TBN0	382 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ST7	Q9NRC1	585 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	USH1C	Q9Y6N9	552 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	GRIN2A	Q12879	1464 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PLB1	Q6P1J6	1458 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	NMI	Q13287	307 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RMND1	Q9NWS8	449 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	LRRD1	A4D1F6	860 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TMEM67	Q5HYA8	995 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	KCTD16	Q68DU8	428 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	3e-7	■■□□□ 14.3
NEDD4L-208	ENST00000456173	NLRP2	Q9NX02	1062 aa		13.92	□□□□□ -0.18
NEDD4L-208	ENST00000456173	HIP1R	O75146	1068 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	C8orf58	Q8NAV2	365 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SPTLC3	Q9NUV7	552 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SUFU	Q9UMX1	484 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ZBTB7B	O15156	539 aa	Predicted RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RASIP1	Q5U651	963 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CYP26C1	Q6V0L0	522 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SPATS2	Q86XZ4	545 aa	Known RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	STAG1	Q8WVM7	1258 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TRIM6	Q9C030	488 aa	Predicted RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CCDC194	A0A1B0GVG4	234 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ALDH3A1	P30838	453 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	MUM1	Q2TAK8	710 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	GNL3L	Q9NVN8	582 aa	Known RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PRDM4	Q9UKN5	801 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	EMILIN1	Q9Y6C2	1016 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TSPYL6	Q8N831	410 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	JAKMIP2	Q96AA8	810 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PARD6B	Q9BYG5	372 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	CWC25	Q9NXE8	425 aa	Predicted RBP	13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	FAM184B	Q9ULE4	1060 aa		13.91	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PSMA7	O14818	248 aa		13.9	□□□□□ -0.18
NEDD4L-208	ENST00000456173	PPFIA4	O75335	1185 aa		13.9	□□□□□ -0.18
NEDD4L-208	ENST00000456173	GIGYF1	O75420	1035 aa	Predicted RBP	13.9	□□□□□ -0.18
NEDD4L-208	ENST00000456173	USP5	P45974	858 aa		13.9	□□□□□ -0.18
NEDD4L-208	ENST00000456173	GUCY2F	P51841	1108 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms