RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 FBF1Q8TES7 1133 aa8.51□□□□□ -1.05
LINC00161-202ENST00000455939 PPP4R2Q9NY27 417 aa8.51□□□□□ -1.05
LINC00161-202ENST00000455939 SOX13Q9UN79 622 aa8.51□□□□□ -1.05
LINC00161-202ENST00000455939 FSCN2O14926 492 aa8.5□□□□□ -1.05
LINC00161-202ENST00000455939 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
LINC00161-202ENST00000455939 IKBKEQ14164 716 aa8.5□□□□□ -1.05
LINC00161-202ENST00000455939 SHISA2Q6UWI4 295 aa8.5□□□□□ -1.05
LINC00161-202ENST00000455939 MAP4K3Q8IVH8 894 aa8.5□□□□□ -1.05
LINC00161-202ENST00000455939 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
LINC00161-202ENST00000455939 BCO2Q9BYV7 579 aa8.5□□□□□ -1.05
LINC00161-202ENST00000455939 SRA1Q9HD15 236 aaKnown RBP8.5□□□□□ -1.05
LINC00161-202ENST00000455939 ERCC3P19447 782 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 ARL4DP49703 201 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 FCGRTP55899 365 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 COL19A1Q14993 1142 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 GPAT2Q6NUI2 795 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 ILDR2Q71H61 639 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 DCAF11Q8TEB1 546 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 SEC31BQ9NQW1 1179 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 USP21Q9UK80 565 aa8.49□□□□□ -1.05
LINC00161-202ENST00000455939 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
LINC00161-202ENST00000455939 PIP4K2BP78356 416 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 DTHD1Q6ZMT9 781 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 GALNT11Q8NCW6 608 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 SPG7Q9UQ90 795 aa8.48□□□□□ -1.05
LINC00161-202ENST00000455939 SELPP16109 830 aa8.47□□□□□ -1.05
LINC00161-202ENST00000455939 CD68P34810 354 aaPredicted RBP8.47□□□□□ -1.05
LINC00161-202ENST00000455939 FGD1P98174 961 aa8.47□□□□□ -1.05
LINC00161-202ENST00000455939 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
LINC00161-202ENST00000455939 PLA2G4EQ3MJ16 856 aa8.47□□□□□ -1.05
LINC00161-202ENST00000455939 PRPF40BQ6NWY9 871 aaKnown RBP8.47□□□□□ -1.05
LINC00161-202ENST00000455939 CLEC4MQ9H2X3 399 aaPredicted RBP8.47□□□□□ -1.05
LINC00161-202ENST00000455939 C1QTNF9BB2RNN3 333 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 C9orf172C9J069 976 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 DLL1O00548 723 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.06
LINC00161-202ENST00000455939 CHRNA4P43681 627 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 IGF2-ASQ6U949 168 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 CD163Q86VB7 1156 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 GLIS3Q8NEA6 775 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 KLHDC7BQ96G42 594 aa8.46□□□□□ -1.06
LINC00161-202ENST00000455939 DUSP9Q99956 384 aaKnown RBP8.46□□□□□ -1.06
LINC00161-202ENST00000455939 ERCC6Q03468 1493 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 DDX3YO15523 660 aaKnown RBP8.45□□□□□ -1.06
LINC00161-202ENST00000455939 ESRRAP11474 423 aaPredicted RBP8.45□□□□□ -1.06
LINC00161-202ENST00000455939 ITPKAP23677 461 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 NLRP12P59046 1061 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 GSTM4Q03013 218 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 FOXD4L6Q3SYB3 417 aaPredicted RBP8.45□□□□□ -1.06
LINC00161-202ENST00000455939 HGSNATQ68CP4 663 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 FOXD4L3Q6VB84 417 aaPredicted RBP8.45□□□□□ -1.06
LINC00161-202ENST00000455939 WNT8BQ93098 351 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 ZNF576Q9H609 170 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 OSGEPQ9NPF4 335 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 AKAP2Q9Y2D5 859 aa8.45□□□□□ -1.06
LINC00161-202ENST00000455939 XPCQ01831 940 aaPredicted RBP8.44□□□□□ -1.06
LINC00161-202ENST00000455939 NRG1Q02297 640 aaPredicted RBP8.44□□□□□ -1.06
LINC00161-202ENST00000455939 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
LINC00161-202ENST00000455939 BCL2L13Q9BXK5 485 aa8.44□□□□□ -1.06
LINC00161-202ENST00000455939 OSBPL7Q9BZF2 842 aa8.44□□□□□ -1.06
LINC00161-202ENST00000455939 RNF19AQ9NV58 838 aa8.44□□□□□ -1.06
LINC00161-202ENST00000455939 KCNK4Q9NYG8 393 aa8.44□□□□□ -1.06
LINC00161-202ENST00000455939 GIPC1O14908 333 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 GNA15P30679 374 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 ZNF157P51786 506 aaPredicted RBP8.43□□□□□ -1.06
LINC00161-202ENST00000455939 PTPN12Q05209 780 aaKnown RBP8.43□□□□□ -1.06
LINC00161-202ENST00000455939 DUOXA2Q1HG44 320 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 ZNF423Q2M1K9 1284 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 FBXO33Q7Z6M2 555 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 USP26Q9BXU7 913 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 SRCIN1Q9C0H9 1055 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 MRPL18Q9H0U6 180 aaKnown RBP8.43□□□□□ -1.06
LINC00161-202ENST00000455939 C12orf49Q9H741 205 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
LINC00161-202ENST00000455939 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
LINC00161-202ENST00000455939 IGHA1P01876 353 aa8.42□□□□□ -1.06
LINC00161-202ENST00000455939 EIF4BP23588 611 aaKnown RBP8.42□□□□□ -1.06
LINC00161-202ENST00000455939 GSTT1P30711 240 aa8.42□□□□□ -1.06
LINC00161-202ENST00000455939 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
LINC00161-202ENST00000455939 ACAD11Q709F0 780 aa8.42□□□□□ -1.06
LINC00161-202ENST00000455939 ADAM11O75078 769 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 XRCC5P13010 732 aaKnown RBP8.41□□□□□ -1.06
LINC00161-202ENST00000455939 PSMD2Q13200 908 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 MBTPS1Q14703 1052 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
LINC00161-202ENST00000455939 UBASH3BQ8TF42 649 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 GIPC2Q8TF65 315 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 FOXD4L4Q8WXT5 416 aaPredicted RBP8.41□□□□□ -1.06
LINC00161-202ENST00000455939 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 FRMD6Q96NE9 622 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 SOX17Q9H6I2 414 aaPredicted RBP8.41□□□□□ -1.06
LINC00161-202ENST00000455939 ZFYVE1Q9HBF4 777 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 FAM8A1Q9UBU6 413 aa8.41□□□□□ -1.06
LINC00161-202ENST00000455939 ALX3O95076 343 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms