RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RLBP1P12271 317 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 MAP2K2P36507 400 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 LMAN1P49257 510 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 PAF1Q8N7H5 531 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 GNA14O95837 355 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 HLTFQ14527 1009 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSMD3-204ENST00000455883 ZKSCAN8Q15776 578 aaPredicted RBP5.87□□□□□ -1.47
CSMD3-204ENST00000455883 PPP2R3AQ06190 1150 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 NAA25Q14CX7 972 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 PIP4K2CQ8TBX8 421 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 CUL5Q93034 780 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 CABIN1Q9Y6J0 2220 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 RNF8O76064 485 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 TRIM42Q8IWZ5 723 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 TCP11L2Q8N4U5 519 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSMD3-204ENST00000455883 IMPG2Q9BZV3 1241 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 CEP126Q9P2H0 1117 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 PLCG2P16885 1265 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 CNNM3Q8NE01 707 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 PSDA5PKW4 1024 aaPredicted RBP5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SRGAP3O43295 1099 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SLC4A8Q2Y0W8 1093 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 EFCAB13Q8IY85 973 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 GOLGA5Q8TBA6 731 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 TANGO6Q9C0B7 1094 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SPG7Q9UQ90 795 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 TNNQ9UQP3 1299 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SPTBP11277 2137 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 MCM6Q14566 821 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 WHAMMQ8TF30 809 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 TBC1D31Q96DN5 1066 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 JRKLQ9Y4A0 524 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 ABCC1P33527 1531 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 CPLX4Q7Z7G2 160 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SCLT1Q96NL6 688 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SATB2Q9UPW6 733 aa5.87□□□□□ -1.47
CSMD3-204ENST00000455883 SPECC1L-ADORA2AF8WAN1 911 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 AP1ARQ63HQ0 302 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 MAATS1Q7Z4T9 603 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 CEP120Q8N960 986 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 TXNDC16Q9P2K2 825 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 ANGPTL3Q9Y5C1 460 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 BBOF1Q8ND07 529 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 LZTS2Q9BRK4 669 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 FAM96AQ9H5X1 160 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 HOMER3Q9NSC5 361 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 ABCC2Q92887 1545 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 CCDC194A0A1B0GVG4 234 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 PPP2R1AP30153 589 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 ESPL1Q14674 2120 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 HDGFL1Q5TGJ6 251 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 AKR1B10O60218 316 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 IWS1Q96ST2 819 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 EPS15L1Q9UBC2 864 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 DNAI1Q9UI46 699 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 ATP5HO75947 161 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 STK10O94804 968 aaKnown RBP5.86□□□□□ -1.47
CSMD3-204ENST00000455883 PCP11498 1178 aaKnown RBP5.86□□□□□ -1.47
CSMD3-204ENST00000455883 GNA11P29992 359 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 CETN3O15182 167 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 STX10O60499 249 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 BAG3O95817 575 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 KIFAP3Q92845 792 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 MOV10L1Q9BXT6 1211 aaKnown RBP5.86□□□□□ -1.47
CSMD3-204ENST00000455883 TMOD2Q9NZR1 351 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 IGSF3O75054 1194 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 HSPA6P17066 643 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 PDCD2Q16342 344 aaPredicted RBP5.86□□□□□ -1.47
CSMD3-204ENST00000455883 MRPL40Q9NQ50 206 aaKnown RBP5.86□□□□□ -1.47
CSMD3-204ENST00000455883 JADE2Q9NQC1 790 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 KIF11P52732 1056 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 ZNF445P59923 1031 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 AIDAQ96BJ3 306 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 RMDN2Q96LZ7 410 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 BCCIPQ9P287 314 aaKnown RBP eCLIP5.86□□□□□ -1.47
CSMD3-204ENST00000455883 I3L4J1 428 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 PRC1O43663 620 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 ADCY5O95622 1261 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 GSTO1P78417 241 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 C10orf76Q5T2E6 689 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 AFAP1L1Q8TED9 768 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 MYRIPQ8NFW9 859 aa5.86□□□□□ -1.47
CSMD3-204ENST00000455883 LMNAP02545 664 aaKnown RBP5.85□□□□□ -1.47
CSMD3-204ENST00000455883 INPP5BP32019 993 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 UBA7P41226 1012 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 CAMK4Q16566 473 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 NBPF20Q3BBV1 942 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 TMTC1Q8IUR5 882 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 EDEM3Q9BZQ6 932 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 GNG11P61952 73 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 NR1H3Q13133 447 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 KANK4Q5T7N3 995 aaPredicted RBP5.85□□□□□ -1.47
CSMD3-204ENST00000455883 NEK1Q96PY6 1258 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 UGGT2Q9NYU1 1516 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 HOXB7P09629 217 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 ZBTB16Q05516 673 aa5.85□□□□□ -1.47
CSMD3-204ENST00000455883 NOLC1Q14978 699 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSMD3-204ENST00000455883 NFE2L2Q16236 605 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms