RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 LPIN2Q92539 896 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 SECISBP2LQ93073 1101 aaKnown RBP10.14□□□□□ -0.79
LMO3-210ENST00000453727 PRIMPOLQ96LW4 560 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 FAM227BQ96M60 508 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 PAG1Q9NWQ8 432 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 DDX49Q9Y6V7 483 aaKnown RBP10.14□□□□□ -0.79
LMO3-210ENST00000453727 AKAP11Q9UKA4 1901 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 HIP1O00291 1037 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 CHGBP05060 677 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 KCNJ4P48050 445 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
LMO3-210ENST00000453727 SCARF1Q14162 830 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 SNRKQ9NRH2 765 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 A0A0D9SFI3 127 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 KLRG2A4D1S0 409 aaPredicted RBP10.13□□□□□ -0.79
LMO3-210ENST00000453727 CHRM1P11229 460 aaPredicted RBP10.13□□□□□ -0.79
LMO3-210ENST00000453727 MAPK8IP2Q13387 824 aaPredicted RBP10.13□□□□□ -0.79
LMO3-210ENST00000453727 GRAPQ13588 217 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 KBTBD3Q8NAB2 608 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 GRAPLQ8TC17 118 aaPredicted RBP10.13□□□□□ -0.79
LMO3-210ENST00000453727 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 MINPP1Q9UNW1 487 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 SLC5A1P13866 664 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 PHKA1P46020 1223 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 FKBP4Q02790 459 aaKnown RBP eCLIP10.13□□□□□ -0.79
LMO3-210ENST00000453727 SLC20A2Q08357 652 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 CCDC102BQ68D86 513 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 PI16Q6UXB8 463 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 RBM17Q96I25 401 aaKnown RBP10.13□□□□□ -0.79
LMO3-210ENST00000453727 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
LMO3-210ENST00000453727 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
LMO3-210ENST00000453727 ANKRD31Q8N7Z5 1873 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 RFX7Q2KHR2 1363 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 IGSF3O75054 1194 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 PDE6BP35913 854 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 MCAMP43121 646 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 ZAP70P43403 619 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 KIAA2012Q0VF49 1180 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 KLHL40Q2TBA0 621 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 PDCL2Q8N4E4 241 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 KIF3AQ9Y496 699 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 WTIPA6NIX2 430 aaPredicted RBP10.12□□□□□ -0.79
LMO3-210ENST00000453727 HOXA10P31260 410 aaPredicted RBP10.12□□□□□ -0.79
LMO3-210ENST00000453727 R3HDM1Q15032 1099 aaKnown RBP10.12□□□□□ -0.79
LMO3-210ENST00000453727 RAB3GAP1Q15042 981 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 RGS22Q8NE09 1264 aa10.12□□□□□ -0.79
LMO3-210ENST00000453727 ZNF512BQ96KM6 892 aaPredicted RBP10.12□□□□□ -0.79
LMO3-210ENST00000453727 RAD50Q92878 1312 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 EPB41L2O43491 1005 aaKnown RBP10.11□□□□□ -0.79
LMO3-210ENST00000453727 ZBTB7AO95365 584 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 SRGNP10124 158 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 ARID4AP29374 1257 aaPredicted RBP10.11□□□□□ -0.79
LMO3-210ENST00000453727 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 PALD1Q9ULE6 856 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 MYO5AQ9Y4I1 1855 aaKnown RBP10.11□□□□□ -0.79
LMO3-210ENST00000453727 MED23Q9ULK4 1368 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 PTH1RQ03431 593 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
LMO3-210ENST00000453727 CRAMP1Q96RY5 1269 aa10.11□□□□□ -0.79
LMO3-210ENST00000453727 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
LMO3-210ENST00000453727 MYH7P12883 1935 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 BBOX1O75936 387 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 PTMAP06454 111 aaKnown RBP10.1□□□□□ -0.79
LMO3-210ENST00000453727 UQCRFS1P1P0C7P4 283 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 MCCP23508 829 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 GTF2F1P35269 517 aaKnown RBP eCLIP10.1□□□□□ -0.79
LMO3-210ENST00000453727 BCAMP50895 628 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 ZNF445P59923 1031 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 UBE4AQ14139 1066 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 SLC51AQ86UW1 340 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 ANKRD2Q9GZV1 360 aa10.1□□□□□ -0.79
LMO3-210ENST00000453727 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
LMO3-210ENST00000453727 CYP2E1P05181 493 aaPredicted RBP10.09□□□□□ -0.79
LMO3-210ENST00000453727 NPR1P16066 1061 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 HSPA4P34932 840 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 RABEP1Q15276 862 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 ANKIB1Q9P2G1 1089 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 CCDC171Q6TFL3 1326 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 H0YIN7 160 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 DDIT3P35638 169 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
LMO3-210ENST00000453727 TSC1Q92574 1164 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 SNX21Q969T3 373 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 TIGD1Q96MW7 591 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 HMG20BQ9P0W2 317 aa10.09□□□□□ -0.79
LMO3-210ENST00000453727 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
LMO3-210ENST00000453727 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
LMO3-210ENST00000453727 RNF113AO15541 343 aaKnown RBP10.08□□□□□ -0.8
LMO3-210ENST00000453727 ALDH1B1P30837 517 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 GYG1P46976 350 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 ANAPC15P60006 121 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 MCMDC2Q4G0Z9 681 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 CCDC129Q6ZRS4 1044 aa10.08□□□□□ -0.8
LMO3-210ENST00000453727 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms