RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 KCTD15Q96SI1 283 aaPredicted RBP12.12□□□□□ -0.47
COPS7B-214ENST00000449784 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
COPS7B-214ENST00000449784 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 IL16Q14005 1332 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 TUBGCP6Q96RT7 1819 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 MYH14Q7Z406 1995 aaKnown RBP12.11□□□□□ -0.47
COPS7B-214ENST00000449784 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 GIGYF1O75420 1035 aaPredicted RBP12.11□□□□□ -0.47
COPS7B-214ENST00000449784 RPS6KA4O75676 772 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 STARD3NLO95772 234 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
COPS7B-214ENST00000449784 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
COPS7B-214ENST00000449784 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
COPS7B-214ENST00000449784 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
COPS7B-214ENST00000449784 MBIPQ9NS73 344 aa12.1□□□□□ -0.47
COPS7B-214ENST00000449784 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
COPS7B-214ENST00000449784 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
COPS7B-214ENST00000449784 AP1G2O75843 785 aa12.09□□□□□ -0.47
COPS7B-214ENST00000449784 RAB15P59190 212 aa12.09□□□□□ -0.47
COPS7B-214ENST00000449784 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
COPS7B-214ENST00000449784 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.09□□□□□ -0.47
COPS7B-214ENST00000449784 AGBL1Q96MI9 1066 aa12.09□□□□□ -0.47
COPS7B-214ENST00000449784 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
COPS7B-214ENST00000449784 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
COPS7B-214ENST00000449784 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 HOXB7P09629 217 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 PTSQ03393 145 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 SMIM5Q71RC9 77 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 MTFR1LQ9H019 292 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 KDM4CQ9H3R0 1056 aa12.08□□□□□ -0.48
COPS7B-214ENST00000449784 COL15A1P39059 1388 aa12.07□□□□□ -0.48
COPS7B-214ENST00000449784 ZBTB7AO95365 584 aa12.07□□□□□ -0.48
COPS7B-214ENST00000449784 IL6STP40189 918 aaPredicted RBP12.07□□□□□ -0.48
COPS7B-214ENST00000449784 EIF5P55010 431 aaKnown RBP12.07□□□□□ -0.48
COPS7B-214ENST00000449784 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
COPS7B-214ENST00000449784 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
COPS7B-214ENST00000449784 A1BGP04217 495 aa12.06□□□□□ -0.48
COPS7B-214ENST00000449784 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
COPS7B-214ENST00000449784 RELBQ01201 579 aa12.06□□□□□ -0.48
COPS7B-214ENST00000449784 GPR161Q8N6U8 529 aaKnown RBP12.06□□□□□ -0.48
COPS7B-214ENST00000449784 LRP5O75197 1615 aa12.06□□□□□ -0.48
COPS7B-214ENST00000449784 FANCIQ9NVI1 1328 aa12.06□□□□□ -0.48
COPS7B-214ENST00000449784 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 INTS6LQ5JSJ4 861 aaKnown RBP12.05□□□□□ -0.48
COPS7B-214ENST00000449784 NBPF10Q6P3W6 841 aaKnown RBP12.05□□□□□ -0.48
COPS7B-214ENST00000449784 Q6ZVU0 165 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 NBPF15Q8N660 670 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 EPS8L1Q8TE68 723 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
COPS7B-214ENST00000449784 CNTNAP3BQ96NU0 1288 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 CNTNAP3Q9BZ76 1288 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 SPON1Q9HCB6 807 aa12.05□□□□□ -0.48
COPS7B-214ENST00000449784 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
COPS7B-214ENST00000449784 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 A0A087WZG4 1122 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 RFC4P35249 363 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 DUSP27Q5VZP5 1158 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 OCSTAMPQ9BR26 566 aa12.04□□□□□ -0.48
COPS7B-214ENST00000449784 SPINT1O43278 529 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 GYS1P13807 737 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 PIP4K2AP48426 406 aaPredicted RBP12.03□□□□□ -0.48
COPS7B-214ENST00000449784 KRT76Q01546 638 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 PTK2Q05397 1052 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 DHX9Q08211 1270 aaKnown RBP12.03□□□□□ -0.48
COPS7B-214ENST00000449784 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 C8orf58Q8NAV2 365 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPS7B-214ENST00000449784 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 TMPRSS4Q9NRS4 437 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 NARFQ9UHQ1 456 aa12.03□□□□□ -0.48
COPS7B-214ENST00000449784 E9PSI1 815 aa12.02□□□□□ -0.49
COPS7B-214ENST00000449784 EIF2S2P20042 333 aaKnown RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.49
COPS7B-214ENST00000449784 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
COPS7B-214ENST00000449784 CCDC155Q8N6L0 562 aa12.02□□□□□ -0.49
COPS7B-214ENST00000449784 INSM2Q96T92 566 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 ZNF395Q9H8N7 513 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.49
COPS7B-214ENST00000449784 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
COPS7B-214ENST00000449784 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
COPS7B-214ENST00000449784 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
COPS7B-214ENST00000449784 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
COPS7B-214ENST00000449784 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
COPS7B-214ENST00000449784 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
COPS7B-214ENST00000449784 SCN7AQ01118 1682 aa12□□□□□ -0.49
COPS7B-214ENST00000449784 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
COPS7B-214ENST00000449784 CAMTA2O94983 1202 aa12□□□□□ -0.49
COPS7B-214ENST00000449784 POLD1P28340 1107 aa12□□□□□ -0.49
COPS7B-214ENST00000449784 HNRNPUQ00839 825 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms