RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TDRD7Q8NHU6 1098 aaKnown RBP23.68■■□□□ 1.38
SGCE-207ENST00000447873 ZBTB22O15209 634 aa23.67■■□□□ 1.38
SGCE-207ENST00000447873 KBTBD3Q8NAB2 608 aa23.67■■□□□ 1.38
SGCE-207ENST00000447873 PDS5AQ29RF7 1337 aaKnown RBP23.67■■□□□ 1.38
SGCE-207ENST00000447873 KIAA2012Q0VF49 1180 aa23.66■■□□□ 1.38
SGCE-207ENST00000447873 TBC1D9Q6ZT07 1266 aa23.66■■□□□ 1.38
SGCE-207ENST00000447873 TAOK3Q9H2K8 898 aa23.66■■□□□ 1.38
SGCE-207ENST00000447873 COL1A1P02452 1464 aaPredicted RBP23.66■■□□□ 1.38
SGCE-207ENST00000447873 PPIP5K2O43314 1243 aa23.65■■□□□ 1.38
SGCE-207ENST00000447873 CHAF1AQ13111 956 aaPredicted RBP23.65■■□□□ 1.38
SGCE-207ENST00000447873 AOC3Q16853 763 aa23.65■■□□□ 1.38
SGCE-207ENST00000447873 DOK7Q18PE1 504 aa23.65■■□□□ 1.38
SGCE-207ENST00000447873 MYO5AQ9Y4I1 1855 aaKnown RBP23.64■■□□□ 1.38
SGCE-207ENST00000447873 HIP1O00291 1037 aa23.64■■□□□ 1.37
SGCE-207ENST00000447873 CHMLP26374 656 aa23.64■■□□□ 1.37
SGCE-207ENST00000447873 VPS33BQ9H267 617 aa23.64■■□□□ 1.37
SGCE-207ENST00000447873 ZNF277Q9NRM2 450 aaPredicted RBP23.64■■□□□ 1.37
SGCE-207ENST00000447873 MYH7P12883 1935 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 CHD4Q14839 1912 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 RFX7Q2KHR2 1363 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 LRRFIP1Q32MZ4 808 aaKnown RBP23.63■■□□□ 1.37
SGCE-207ENST00000447873 PODNQ7Z5L7 613 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 TICAM2Q86XR7 235 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 BACH2Q9BYV9 841 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.63■■□□□ 1.37
SGCE-207ENST00000447873 DBNDD1Q9H9R9 158 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 PIH1D3Q9NQM4 214 aaKnown RBP23.63■■□□□ 1.37
SGCE-207ENST00000447873 DIAPH3Q9NSV4 1193 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 JAG2Q9Y219 1238 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 SRCAPQ6ZRS2 3230 aa23.63■■□□□ 1.37
SGCE-207ENST00000447873 DOCK2Q92608 1830 aa23.62■■□□□ 1.37
SGCE-207ENST00000447873 IDH1O75874 414 aaKnown RBP23.62■■□□□ 1.37
SGCE-207ENST00000447873 LARGE2Q8N3Y3 721 aa23.62■■□□□ 1.37
SGCE-207ENST00000447873 WDR66Q8TBY9 1149 aa23.62■■□□□ 1.37
SGCE-207ENST00000447873 ABCF2Q9UG63 623 aa23.62■■□□□ 1.37
SGCE-207ENST00000447873 NFKBIEO00221 500 aa23.61■■□□□ 1.37
SGCE-207ENST00000447873 LRP2BPQ9P2M1 347 aa23.61■■□□□ 1.37
SGCE-207ENST00000447873 ECE2O60344 883 aa23.61■■□□□ 1.37
SGCE-207ENST00000447873 IARSP41252 1262 aaKnown RBP23.61■■□□□ 1.37
SGCE-207ENST00000447873 MAP3K12Q12852 859 aa23.61■■□□□ 1.37
SGCE-207ENST00000447873 ZGPATQ8N5A5 531 aaKnown RBP23.61■■□□□ 1.37
SGCE-207ENST00000447873 LTBP3Q9NS15 1303 aa23.6■■□□□ 1.37
SGCE-207ENST00000447873 ZSCAN25Q6NSZ9 544 aa23.6■■□□□ 1.37
SGCE-207ENST00000447873 CWC27Q6UX04 472 aaKnown RBP23.6■■□□□ 1.37
SGCE-207ENST00000447873 ZFYP08048 801 aaPredicted RBP23.59■■□□□ 1.37
SGCE-207ENST00000447873 GTF2IP78347 998 aa23.59■■□□□ 1.37
SGCE-207ENST00000447873 FBXW7Q969H0 707 aa23.59■■□□□ 1.37
SGCE-207ENST00000447873 FAM205AQ6ZU69 1335 aa23.59■■□□□ 1.37
SGCE-207ENST00000447873 SALL1Q9NSC2 1324 aa23.59■■□□□ 1.37
SGCE-207ENST00000447873 RNF113AO15541 343 aaKnown RBP23.58■■□□□ 1.37
SGCE-207ENST00000447873 SLC9C2Q5TAH2 1124 aa23.58■■□□□ 1.37
SGCE-207ENST00000447873 SPTY2D1Q68D10 685 aaPredicted RBP23.58■■□□□ 1.37
SGCE-207ENST00000447873 ARHGAP27Q6ZUM4 889 aa23.58■■□□□ 1.37
SGCE-207ENST00000447873 TBC1D22AQ8WUA7 517 aa23.58■■□□□ 1.37
SGCE-207ENST00000447873 RUFY2Q8WXA3 655 aa23.58■■□□□ 1.37
SGCE-207ENST00000447873 RAI14Q9P0K7 980 aa23.58■■□□□ 1.37
SGCE-207ENST00000447873 NMIQ13287 307 aaPredicted RBP23.57■■□□□ 1.36
SGCE-207ENST00000447873 TTLL5Q6EMB2 1281 aa23.57■■□□□ 1.36
SGCE-207ENST00000447873 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
SGCE-207ENST00000447873 CCDC88AQ3V6T2 1871 aa23.57■■□□□ 1.36
SGCE-207ENST00000447873 RASSF7Q02833 373 aa23.57■■□□□ 1.36
SGCE-207ENST00000447873 MFSD14BQ5SR56 506 aa23.57■■□□□ 1.36
SGCE-207ENST00000447873 NIM1KQ8IY84 436 aa23.57■■□□□ 1.36
SGCE-207ENST00000447873 SCN9AQ15858 1988 aa23.56■■□□□ 1.36
SGCE-207ENST00000447873 EIF5BO60841 1220 aaKnown RBP23.56■■□□□ 1.36
SGCE-207ENST00000447873 CHGBP05060 677 aa23.56■■□□□ 1.36
SGCE-207ENST00000447873 JDP2Q8WYK2 163 aa23.56■■□□□ 1.36
SGCE-207ENST00000447873 FAM227BQ96M60 508 aa23.56■■□□□ 1.36
SGCE-207ENST00000447873 ESYT1Q9BSJ8 1104 aa23.56■■□□□ 1.36
SGCE-207ENST00000447873 PDE6AP16499 860 aa23.55■■□□□ 1.36
SGCE-207ENST00000447873 ADD2P35612 726 aa23.55■■□□□ 1.36
SGCE-207ENST00000447873 MAGEB6Q8N7X4 407 aa23.55■■□□□ 1.36
SGCE-207ENST00000447873 A0A0D9SFI3 127 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 SEC24BO95487 1268 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 LDHBP07195 334 aaKnown RBP23.54■■□□□ 1.36
SGCE-207ENST00000447873 YBX3P16989 372 aaKnown RBP eCLIP23.54■■□□□ 1.36
SGCE-207ENST00000447873 UBE3CQ15386 1083 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 SLFNL1Q499Z3 407 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 KCNQ5Q9NR82 932 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 ZNRF3Q9ULT6 936 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 COL4A5P29400 1685 aa23.54■■□□□ 1.36
SGCE-207ENST00000447873 USP17L3A6NCW0 530 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 USP17L4A6NCW7 530 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 YDJCA8MPS7 323 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 PRDX5P30044 214 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 ZMYM1Q5SVZ6 1142 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 STRIP1Q5VSL9 837 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 USP17L1Q7RTZ2 530 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 ZNF532Q9HCE3 1301 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 HELLSQ9NRZ9 838 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 RAD50Q92878 1312 aa23.53■■□□□ 1.36
SGCE-207ENST00000447873 SGSM2O43147 1006 aa23.52■■□□□ 1.36
SGCE-207ENST00000447873 IGSF3O75054 1194 aa23.52■■□□□ 1.36
SGCE-207ENST00000447873 MFAP1P55081 439 aaKnown RBP23.52■■□□□ 1.36
SGCE-207ENST00000447873 MCMDC2Q4G0Z9 681 aa23.52■■□□□ 1.36
SGCE-207ENST00000447873 DZIP1Q86YF9 867 aaKnown RBP23.52■■□□□ 1.36
SGCE-207ENST00000447873 APPBP2Q92624 585 aa23.52■■□□□ 1.36
SGCE-207ENST00000447873 PSME4Q14997 1843 aa23.52■■□□□ 1.36
SGCE-207ENST00000447873 MAST2Q6P0Q8 1798 aa23.52■■□□□ 1.36
SGCE-207ENST00000447873 MECOMQ03112 1051 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms