RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 DOK7Q18PE1 504 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 GPR101Q96P66 508 aaPredicted RBP7.07□□□□□ -1.28
PROM1-201ENST00000447510 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 ATP6V0A2Q9Y487 856 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 PAPPAQ13219 1627 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 GLRX3O76003 335 aaKnown RBP7.07□□□□□ -1.28
PROM1-201ENST00000447510 GYG1P46976 350 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 NUCB1Q02818 461 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 UBE4AQ14139 1066 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 NIM1KQ8IY84 436 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 TAOK3Q9H2K8 898 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 GPSM2P81274 684 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 CNTROBQ8N137 903 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 PRPF40AO75400 957 aaKnown RBP7.06□□□□□ -1.28
PROM1-201ENST00000447510 OLFM4Q6UX06 510 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 C17orf53Q8N3J3 647 aaPredicted RBP7.06□□□□□ -1.28
PROM1-201ENST00000447510 EAF2Q96CJ1 260 aaPredicted RBP7.06□□□□□ -1.28
PROM1-201ENST00000447510 SYT17Q9BSW7 474 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 GJA3Q9Y6H8 435 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 ERICH4A6NGS2 130 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 GOLIM4O00461 696 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 SASH1O94885 1247 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 HOXA10P31260 410 aaPredicted RBP7.06□□□□□ -1.28
PROM1-201ENST00000447510 NLGN2Q8NFZ4 835 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 IPO4Q8TEX9 1081 aaKnown RBP7.06□□□□□ -1.28
PROM1-201ENST00000447510 ZKSCAN5Q9Y2L8 839 aa7.06□□□□□ -1.28
PROM1-201ENST00000447510 EP400Q96L91 3159 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 F8W031 263 aaPredicted RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 RFX5P48382 616 aaPredicted RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 BCAMP50895 628 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 PDCL2Q8N4E4 241 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.05□□□□□ -1.28
PROM1-201ENST00000447510 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 ZNF277Q9NRM2 450 aaPredicted RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 NOL7Q9UMY1 257 aaKnown RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 RIPOR2Q9Y4F9 1068 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 SYCE3A1L190 88 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 ADORA1P30542 326 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 EIF6P56537 245 aaKnown RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 DZIP1Q86YF9 867 aaKnown RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 DBNDD1Q9H9R9 158 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 CCDC39Q9UFE4 941 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 LY75O60449 1722 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 LETM1O95202 739 aaPredicted RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 PTMSP20962 102 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 CRY2Q49AN0 593 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 ATG9AQ7Z3C6 839 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 OTUD7AQ8TE49 926 aaPredicted RBP7.05□□□□□ -1.28
PROM1-201ENST00000447510 PPP1R9BQ96SB3 815 aa7.05□□□□□ -1.28
PROM1-201ENST00000447510 APPP05067 770 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 PDE1AP54750 535 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 GTF2IP78347 998 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 GRIPAP1Q4V328 841 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 UTP14CQ5TAP6 766 aaKnown RBP7.04□□□□□ -1.28
PROM1-201ENST00000447510 GTPBP4Q9BZE4 634 aaKnown RBP7.04□□□□□ -1.28
PROM1-201ENST00000447510 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
PROM1-201ENST00000447510 KIF20AO95235 890 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 U2AF2P26368 475 aaKnown RBP eCLIP7.04□□□□□ -1.286e-6■■■■□ 22.5
PROM1-201ENST00000447510 MAP3K12Q12852 859 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 CCDC102BQ68D86 513 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 TBC1D16Q8TBP0 767 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 DENND2AQ9ULE3 1009 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 KIF3AQ9Y496 699 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 GRIN3BO60391 1043 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 PTGER2P43116 358 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 PHKA1P46020 1223 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 AOC3Q16853 763 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 SPTY2D1Q68D10 685 aaPredicted RBP7.04□□□□□ -1.28
PROM1-201ENST00000447510 ZSCAN25Q6NSZ9 544 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 RUFY2Q8WXA3 655 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 GPR108Q9NPR9 543 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 TMEM51Q9NW97 253 aa7.04□□□□□ -1.28
PROM1-201ENST00000447510 CICQ96RK0 1608 aaPredicted RBP7.04□□□□□ -1.28
PROM1-201ENST00000447510 TERF1P54274 439 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 ZSCAN23Q3MJ62 389 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 DBNLQ9UJU6 430 aaKnown RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 RAD17O75943 681 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 TNNT3P45378 269 aaPredicted RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 TTF1Q15361 905 aaPredicted RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 TTLL5Q6EMB2 1281 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 ZGPATQ8N5A5 531 aaKnown RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 NDUFB9Q9Y6M9 179 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 BAG4O95429 457 aaKnown RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 RBM26Q5T8P6 1007 aaKnown RBP7.03□□□□□ -1.28
PROM1-201ENST00000447510 ZBTB9Q96C00 473 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 CHAMP1Q96JM3 812 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 RNF181Q9P0P0 153 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 RTL9Q8NET4 1388 aa7.03□□□□□ -1.28
PROM1-201ENST00000447510 TTC41PQ6P2S7 1318 aa7.02□□□□□ -1.28
PROM1-201ENST00000447510 NOL8Q76FK4 1167 aaKnown RBP7.02□□□□□ -1.28
PROM1-201ENST00000447510 WDR66Q8TBY9 1149 aa7.02□□□□□ -1.28
PROM1-201ENST00000447510 NUP98P52948 1817 aa7.02□□□□□ -1.29
PROM1-201ENST00000447510 ARFGEF2Q9Y6D5 1785 aa7.02□□□□□ -1.29
PROM1-201ENST00000447510 LDHBP07195 334 aaKnown RBP7.02□□□□□ -1.29
PROM1-201ENST00000447510 LDHCP07864 332 aa7.02□□□□□ -1.29
PROM1-201ENST00000447510 RAB3GAP1Q15042 981 aa7.02□□□□□ -1.29
PROM1-201ENST00000447510 DPY19L2Q6NUT2 758 aa7.02□□□□□ -1.29
PROM1-201ENST00000447510 PLEKHM2Q8IWE5 1019 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms