RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MAGEB6Q8N7X4 407 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 MYH3P11055 1940 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 ZNF213O14771 459 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 FOXP2O15409 715 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 GYG1P46976 350 aa11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 UBE3CQ15386 1083 aa11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
COL6A4P1-201ENST00000446690 F13A1P00488 732 aa11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 SLC10A5Q5PT55 438 aa11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 VPS37DQ86XT2 251 aa11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 LRP2BPQ9P2M1 347 aa11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.6
COL6A4P1-201ENST00000446690 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 MTMR6Q9Y217 621 aa11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 SPEF2Q9C093 1822 aa11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
COL6A4P1-201ENST00000446690 CICQ96RK0 1608 aaPredicted RBP11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 JAK2O60674 1132 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 CCT2P78371 535 aaKnown RBP11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 ABCF2Q9UG63 623 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 ATP6V1DQ9Y5K8 247 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 BTAF1O14981 1849 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 TCRBV5S4A2TA0A5A2 114 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 TRIM37O94972 964 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 SCRN1Q12765 414 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 ATRNO75882 1429 aa11.26□□□□□ -0.61
COL6A4P1-201ENST00000446690 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 MBD4O95243 580 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 XRCC6P12956 609 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 PDCP20941 246 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 GNL3LQ9NVN8 582 aaKnown RBP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 RGL2O15211 777 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 FIBPO43427 364 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 GADD45BO75293 160 aaPredicted RBP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 ZSCAN23Q3MJ62 389 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 KRT27Q7Z3Y8 459 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 MIGA1Q8NAN2 632 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 NCOA7Q8NI08 942 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 LRP5O75197 1615 aa11.25□□□□□ -0.61
COL6A4P1-201ENST00000446690 PRC1O43663 620 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 MCM5P33992 734 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 FOSBP53539 338 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 TRDNQ13061 729 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 NFIXQ14938 502 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 GRPEL1Q9HAV7 217 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 NCOA5Q9HCD5 579 aaKnown RBP11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 COL4A1P02462 1669 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 PFKFB2O60825 505 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 MBD3O95983 291 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 MRE11P49959 708 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 TFCP2L1Q9NZI6 479 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 DENND2AQ9ULE3 1009 aa11.24□□□□□ -0.61
COL6A4P1-201ENST00000446690 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 H3BQV1 296 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 CYP7A1P22680 504 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 FAM173BQ6P4H8 233 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 FAM84BQ96KN1 310 aaPredicted RBP11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 NAPBQ9H115 298 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 PRKAB2O43741 272 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 KLRK1P26718 216 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms