RNA–Protein interactions for RNA: ENST00000443308.6

SHISA5-209, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 1,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-209ENST00000443308 PDE6AP16499 860 aa19.42■□□□□ 0.7
SHISA5-209ENST00000443308 ST3GAL1Q11201 340 aa19.42■□□□□ 0.7
SHISA5-209ENST00000443308 GNL3LQ9NVN8 582 aaKnown RBP19.42■□□□□ 0.7
SHISA5-209ENST00000443308 WDR19Q8NEZ3 1342 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
SHISA5-209ENST00000443308 BICDL1Q6ZP65 573 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 C3orf67Q6ZVT6 689 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 IDH1O75874 414 aaKnown RBP19.41■□□□□ 0.7
SHISA5-209ENST00000443308 GJB2P29033 226 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 ALX1Q15699 326 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 Q6ZUG5 572 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 KRT27Q7Z3Y8 459 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 LARP6Q9BRS8 491 aaKnown RBP19.41■□□□□ 0.7
SHISA5-209ENST00000443308 ANKRD2Q9GZV1 360 aa19.41■□□□□ 0.7
SHISA5-209ENST00000443308 ANO8Q9HCE9 1232 aaPredicted RBP19.41■□□□□ 0.7
SHISA5-209ENST00000443308 PDS5AQ29RF7 1337 aaKnown RBP19.4■□□□□ 0.7
SHISA5-209ENST00000443308 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
SHISA5-209ENST00000443308 SEMA3EO15041 775 aa19.4■□□□□ 0.7
SHISA5-209ENST00000443308 EVCP57679 992 aa19.4■□□□□ 0.7
SHISA5-209ENST00000443308 COL9A3Q14050 684 aaPredicted RBP19.4■□□□□ 0.7
SHISA5-209ENST00000443308 TMED8Q6PL24 325 aaPredicted RBP19.4■□□□□ 0.7
SHISA5-209ENST00000443308 GTF3C6Q969F1 213 aa19.4■□□□□ 0.7
SHISA5-209ENST00000443308 LLPHQ9BRT6 129 aaKnown RBP19.4■□□□□ 0.7
SHISA5-209ENST00000443308 LAMA4Q16363 1823 aa19.4■□□□□ 0.7
SHISA5-209ENST00000443308 FSD2A1L4K1 749 aa19.39■□□□□ 0.7
SHISA5-209ENST00000443308 IGSF3O75054 1194 aa19.39■□□□□ 0.7
SHISA5-209ENST00000443308 L1TD1Q5T7N2 865 aaKnown RBP19.39■□□□□ 0.7
SHISA5-209ENST00000443308 LRRC4BQ9NT99 713 aa19.39■□□□□ 0.7
SHISA5-209ENST00000443308 DDX49Q9Y6V7 483 aaKnown RBP19.39■□□□□ 0.7
SHISA5-209ENST00000443308 BCAMP50895 628 aa19.39■□□□□ 0.69
SHISA5-209ENST00000443308 CAVIN4Q5BKX8 364 aa19.39■□□□□ 0.69
SHISA5-209ENST00000443308 AMIGO3Q86WK7 504 aa19.39■□□□□ 0.69
SHISA5-209ENST00000443308 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
SHISA5-209ENST00000443308 COL4A1P02462 1669 aa19.38■□□□□ 0.69
SHISA5-209ENST00000443308 ZNF213O14771 459 aa19.38■□□□□ 0.69
SHISA5-209ENST00000443308 TMEM87AQ8NBN3 555 aa19.38■□□□□ 0.69
SHISA5-209ENST00000443308 ZNF274Q96GC6 653 aaPredicted RBP19.38■□□□□ 0.69
SHISA5-209ENST00000443308 STRBPQ96SI9 672 aaKnown RBP19.38■□□□□ 0.69
SHISA5-209ENST00000443308 PFKFB2O60825 505 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 MBD3O95983 291 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 GNAT2P19087 354 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 NECAB1Q8N987 351 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 CELF1Q92879 486 aaKnown RBP19.37■□□□□ 0.69
SHISA5-209ENST00000443308 TCEANC2Q96MN5 208 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 WWC3Q9ULE0 1092 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 PNPLA7Q6ZV29 1317 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 F13A1P00488 732 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 TM4SF1P30408 202 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 AIDAQ96BJ3 306 aa19.37■□□□□ 0.69
SHISA5-209ENST00000443308 SNAP23O00161 211 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 PRPF40AO75400 957 aaKnown RBP19.36■□□□□ 0.69
SHISA5-209ENST00000443308 FGD1P98174 961 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 NFIXQ14938 502 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 TTLL5Q6EMB2 1281 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 NCOA7Q8NI08 942 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 BRF1Q92994 677 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 DENND2AQ9ULE3 1009 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
SHISA5-209ENST00000443308 MYO5AQ9Y4I1 1855 aaKnown RBP19.36■□□□□ 0.69
SHISA5-209ENST00000443308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
SHISA5-209ENST00000443308 PATL2C9JE40 543 aaKnown RBP19.35■□□□□ 0.69
SHISA5-209ENST00000443308 MCM5P33992 734 aa19.35■□□□□ 0.69
SHISA5-209ENST00000443308 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
SHISA5-209ENST00000443308 FBXO33Q7Z6M2 555 aa19.35■□□□□ 0.69
SHISA5-209ENST00000443308 BRWD3Q6RI45 1802 aa19.35■□□□□ 0.69
SHISA5-209ENST00000443308 GOLGA6L3A6NEY3 463 aa19.35■□□□□ 0.69
SHISA5-209ENST00000443308 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
SHISA5-209ENST00000443308 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
SHISA5-209ENST00000443308 MAGEB6Q8N7X4 407 aa19.35■□□□□ 0.69
SHISA5-209ENST00000443308 GZF1Q9H116 711 aaPredicted RBP19.35■□□□□ 0.69
SHISA5-209ENST00000443308 MB21D2Q8IYB1 491 aaPredicted RBP19.34■□□□□ 0.69
SHISA5-209ENST00000443308 SMARCC2Q8TAQ2 1214 aa19.34■□□□□ 0.69
SHISA5-209ENST00000443308 RBM6P78332 1123 aaKnown RBP19.33■□□□□ 0.69
SHISA5-209ENST00000443308 CSPP1Q1MSJ5 1256 aa19.33■□□□□ 0.69
SHISA5-209ENST00000443308 CNBD1Q8NA66 436 aa19.33■□□□□ 0.69
SHISA5-209ENST00000443308 FAM84BQ96KN1 310 aaPredicted RBP19.33■□□□□ 0.69
SHISA5-209ENST00000443308 PKNOX2Q96KN3 472 aa19.33■□□□□ 0.69
SHISA5-209ENST00000443308 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.68
SHISA5-209ENST00000443308 LRP2BPQ9P2M1 347 aa19.33■□□□□ 0.68
SHISA5-209ENST00000443308 KIF3AQ9Y496 699 aa19.33■□□□□ 0.68
SHISA5-209ENST00000443308 PHF14O94880 888 aa19.32■□□□□ 0.68
SHISA5-209ENST00000443308 TRDNQ13061 729 aa19.32■□□□□ 0.68
SHISA5-209ENST00000443308 RALYLQ86SE5 291 aaKnown RBP19.32■□□□□ 0.68
SHISA5-209ENST00000443308 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
SHISA5-209ENST00000443308 KLHL34Q8N239 644 aa19.32■□□□□ 0.68
SHISA5-209ENST00000443308 TAF1P21675 1872 aa19.32■□□□□ 0.68
SHISA5-209ENST00000443308 A0A0G2JLW4 131 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 GYS1P13807 737 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 SCRN1Q12765 414 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 FOXD4L5Q5VV16 416 aaPredicted RBP19.31■□□□□ 0.68
SHISA5-209ENST00000443308 FOXD4L4Q8WXT5 416 aaPredicted RBP19.31■□□□□ 0.68
SHISA5-209ENST00000443308 GYG1P46976 350 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 ZNF445P59923 1031 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 GRAPQ13588 217 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
SHISA5-209ENST00000443308 NACAP1Q9BZK3 213 aa19.31■□□□□ 0.68
SHISA5-209ENST00000443308 PLSCR1O15162 318 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms