RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PRPF40BQ6NWY9 871 aaKnown RBP9.44□□□□□ -0.9
COPS3-203ENST00000439936 FRAT1Q92837 279 aaPredicted RBP9.44□□□□□ -0.9
COPS3-203ENST00000439936 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
COPS3-203ENST00000439936 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
COPS3-203ENST00000439936 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
COPS3-203ENST00000439936 TNNQ9UQP3 1299 aa9.44□□□□□ -0.9
COPS3-203ENST00000439936 TNRC6CQ9HCJ0 1690 aaKnown RBP9.44□□□□□ -0.9
COPS3-203ENST00000439936 CHD4Q14839 1912 aa9.43□□□□□ -0.9
COPS3-203ENST00000439936 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
COPS3-203ENST00000439936 TTLL11Q8NHH1 800 aa9.43□□□□□ -0.9
COPS3-203ENST00000439936 ZNF516Q92618 1163 aa9.43□□□□□ -0.9
COPS3-203ENST00000439936 USP44Q9H0E7 712 aa9.43□□□□□ -0.9
COPS3-203ENST00000439936 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
COPS3-203ENST00000439936 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
COPS3-203ENST00000439936 CCDC88AQ3V6T2 1871 aa9.43□□□□□ -0.9
COPS3-203ENST00000439936 KIF16BQ96L93 1317 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 GRM8O00222 908 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 TRIM66O15016 1216 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 BBOX1O75936 387 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 CSF1RP07333 972 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 NBPF7P0C2Y1 421 aaPredicted RBP9.42□□□□□ -0.9
COPS3-203ENST00000439936 FOXO4P98177 505 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 OLFM4Q6UX06 510 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 ATF7IPQ6VMQ6 1270 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 CLUAP1Q96AJ1 413 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
COPS3-203ENST00000439936 PLA2G12BQ9BX93 195 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 SEC31BQ9NQW1 1179 aa9.42□□□□□ -0.9
COPS3-203ENST00000439936 SBF1O95248 1867 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 UTYO14607 1347 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 ABCC4O15439 1325 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 TRIM27P14373 513 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 CCT4P50991 539 aaKnown RBP9.41□□□□□ -0.9
COPS3-203ENST00000439936 RPS8P62241 208 aaKnown RBP9.41□□□□□ -0.9
COPS3-203ENST00000439936 GRAPQ13588 217 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 EPHA10Q5JZY3 1008 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 ZKSCAN2Q63HK3 967 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 INTS3Q68E01 1043 aaKnown RBP9.41□□□□□ -0.9
COPS3-203ENST00000439936 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
COPS3-203ENST00000439936 CELF1Q92879 486 aaKnown RBP9.41□□□□□ -0.9
COPS3-203ENST00000439936 RCAN3Q9UKA8 241 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 MYH3P11055 1940 aa9.41□□□□□ -0.9
COPS3-203ENST00000439936 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.9
COPS3-203ENST00000439936 CTSWP56202 376 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 CCDC152Q4G0S7 254 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 ZNF787Q6DD87 383 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 LMBR1LQ6UX01 489 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 SLC51AQ86UW1 340 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 SP8Q8IXZ3 490 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 KAZALD1Q96I82 304 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 SUCLG2Q96I99 432 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 PHOX2BQ99453 314 aa9.4□□□□□ -0.9
COPS3-203ENST00000439936 FER1L6Q2WGJ9 1857 aa9.4□□□□□ -0.91
COPS3-203ENST00000439936 NFKBIEO00221 500 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 PPEF1O14829 653 aaPredicted RBP9.39□□□□□ -0.91
COPS3-203ENST00000439936 PRELPP51888 382 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 SOGA3Q5TF21 947 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 RTKN2Q8IZC4 609 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 GREM2Q9H772 168 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 ATP6V0A2Q9Y487 856 aa9.39□□□□□ -0.91
COPS3-203ENST00000439936 PLIN1O60240 522 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 RLBP1P12271 317 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 RASSF7Q02833 373 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 CCDC93Q567U6 631 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 DZIP1LQ8IYY4 767 aaKnown RBP9.38□□□□□ -0.91
COPS3-203ENST00000439936 TMEM57Q8N5G2 664 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 COL4A1P02462 1669 aa9.38□□□□□ -0.91
COPS3-203ENST00000439936 ITGA6P23229 1130 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 YY1P25490 414 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 C9orf131Q5VYM1 1079 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 TMC4Q7Z404 712 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 MPNDQ8N594 471 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 MEIS3Q99687 375 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 TMX4Q9H1E5 349 aaPredicted RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 ANKRD18BA2A2Z9 1011 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 RCCD1A6NED2 376 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 OATP04181 439 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 LMNB1P20700 586 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 FKBP4Q02790 459 aaKnown RBP eCLIP9.37□□□□□ -0.91
COPS3-203ENST00000439936 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 METTL3Q86U44 580 aaKnown RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 SLF2Q8IX21 1173 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 ANKRD44Q8N8A2 993 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 PANK1Q8TE04 598 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 CDC5LQ99459 802 aaKnown RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 BICC1Q9H694 974 aaKnown RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 RNF181Q9P0P0 153 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 NSFL1CQ9UNZ2 370 aaKnown RBP9.37□□□□□ -0.91
COPS3-203ENST00000439936 CHMP3Q9Y3E7 222 aa9.37□□□□□ -0.91
COPS3-203ENST00000439936 RTL9Q8NET4 1388 aa9.36□□□□□ -0.91
COPS3-203ENST00000439936 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms