RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
PCNX3-202ENST00000439247 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
PCNX3-202ENST00000439247 ZNF609O15014 1411 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 CTAGE5O15320 804 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 CYP27B1O15528 508 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 POLR3DP05423 398 aaPredicted RBP15.78■□□□□ 0.12
PCNX3-202ENST00000439247 ATP1A3P13637 1013 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 LMOD1P29536 600 aaPredicted RBP15.78■□□□□ 0.12
PCNX3-202ENST00000439247 C1orf141Q5JVX7 400 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 RAB11FIP4Q86YS3 637 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 SMARCC2Q8TAQ2 1214 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 GPHNQ9NQX3 736 aaPredicted RBP15.78■□□□□ 0.12
PCNX3-202ENST00000439247 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
PCNX3-202ENST00000439247 CYP2C19P33261 490 aa15.77■□□□□ 0.12
PCNX3-202ENST00000439247 TSGA10IPQ3SY00 556 aa15.77■□□□□ 0.12
PCNX3-202ENST00000439247 USPL1Q5W0Q7 1092 aa15.77■□□□□ 0.12
PCNX3-202ENST00000439247 OSBPL5Q9H0X9 879 aaPredicted RBP15.77■□□□□ 0.12
PCNX3-202ENST00000439247 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
PCNX3-202ENST00000439247 SFPQP23246 707 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCNX3-202ENST00000439247 FMR1NBQ8N0W7 255 aaPredicted RBP15.77■□□□□ 0.11
PCNX3-202ENST00000439247 CLIC4Q9Y696 253 aa15.77■□□□□ 0.11
PCNX3-202ENST00000439247 ALDH1L1O75891 902 aa15.77■□□□□ 0.11
PCNX3-202ENST00000439247 HSPA1LP34931 641 aa15.77■□□□□ 0.11
PCNX3-202ENST00000439247 PIP4K2AP48426 406 aaPredicted RBP15.77■□□□□ 0.11
PCNX3-202ENST00000439247 ST5P78524 1137 aa15.77■□□□□ 0.11
PCNX3-202ENST00000439247 CARD10Q9BWT7 1032 aa15.77■□□□□ 0.11
PCNX3-202ENST00000439247 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
PCNX3-202ENST00000439247 GSDMDP57764 484 aa15.76■□□□□ 0.11
PCNX3-202ENST00000439247 PFKFB2O60825 505 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 IGKV5-2P06315 115 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 PHKG2P15735 406 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 GYS2P54840 703 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 TFCP2Q12800 502 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 DPF2Q92785 391 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 JCADQ9P266 1359 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 URI1O94763 535 aaPredicted RBP15.75■□□□□ 0.11
PCNX3-202ENST00000439247 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
PCNX3-202ENST00000439247 CARD6Q9BX69 1037 aa15.75■□□□□ 0.11
PCNX3-202ENST00000439247 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.75■□□□□ 0.11
PCNX3-202ENST00000439247 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
PCNX3-202ENST00000439247 MYL6BP14649 208 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 KRT32Q14532 448 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 MRPS27Q92552 414 aaKnown RBP15.74■□□□□ 0.11
PCNX3-202ENST00000439247 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 NEDD4P46934 1319 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 OVOS2A0A0G2JMS6 1433 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 KDM6AO15550 1401 aaPredicted RBP15.74■□□□□ 0.11
PCNX3-202ENST00000439247 CCDC34Q96HJ3 373 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 CALCOCO1Q9P1Z2 691 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 KIAA1468Q9P260 1216 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
PCNX3-202ENST00000439247 SASH3O75995 380 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
PCNX3-202ENST00000439247 UBXN4Q92575 508 aa15.74■□□□□ 0.11
PCNX3-202ENST00000439247 NAT10Q9H0A0 1025 aaKnown RBP15.74■□□□□ 0.11
PCNX3-202ENST00000439247 IL2RBP14784 551 aa15.73■□□□□ 0.11
PCNX3-202ENST00000439247 NCAPHQ15003 741 aa15.73■□□□□ 0.11
PCNX3-202ENST00000439247 ZRANB2O95218 330 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCNX3-202ENST00000439247 FDPSP14324 419 aaKnown RBP15.73■□□□□ 0.11
PCNX3-202ENST00000439247 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
PCNX3-202ENST00000439247 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
PCNX3-202ENST00000439247 UTP14AQ9BVJ6 771 aaKnown RBP15.73■□□□□ 0.11
PCNX3-202ENST00000439247 KCND1Q9NSA2 647 aa15.73■□□□□ 0.11
PCNX3-202ENST00000439247 SF3A1Q15459 793 aaKnown RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 ZRSR1Q15695 479 aaKnown RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 TRIM65Q6PJ69 517 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 ZFP91Q96JP5 570 aaPredicted RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 ZNF396Q96N95 335 aaPredicted RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 PLCH1Q4KWH8 1693 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 KIF2AO00139 706 aaPredicted RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 ETF1P62495 437 aaKnown RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 TMCO3Q6UWJ1 677 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 MYH15Q9Y2K3 1946 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 TMEM232C9JQI7 657 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 TULP2O00295 520 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 HOXB7P09629 217 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 DHX32Q7L7V1 743 aaKnown RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 IMPACTQ9P2X3 320 aa15.72■□□□□ 0.11
PCNX3-202ENST00000439247 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
PCNX3-202ENST00000439247 FANCCQ00597 558 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 STK38Q15208 465 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 MNS1Q8NEH6 495 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 HSD3B7Q9H2F3 369 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 LRP6O75581 1613 aa15.71■□□□□ 0.11
PCNX3-202ENST00000439247 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
PCNX3-202ENST00000439247 PDIA3P30101 505 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms