RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SOX1O00570 391 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 FZD6O60353 706 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 COBLO75128 1261 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 BMP3P12645 472 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 FKBP4Q02790 459 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 SF3B2Q13435 895 aaKnown RBP5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 HGSNATQ68CP4 663 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 RNF43Q68DV7 783 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 VN1R5Q7Z5H4 357 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 ZDHHC13Q8IUH4 622 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 FAM20CQ8IXL6 584 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 RUSC1Q9BVN2 902 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 FOXD3Q9UJU5 478 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 MEGF11A6BM72 1044 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 MED26O95402 600 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 ABL1P00519 1130 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 PREPP48147 710 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 IKBKEQ14164 716 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 FDX2Q6P4F2 183 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 FAM83CQ9BQN1 747 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 DBNDD2Q9BQY9 259 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 KCNF1Q9H3M0 494 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 CCDC87Q9NVE4 849 aa5.97□□□□□ -1.45
HMGB1P18-201ENST00000438801 CC2D2AQ9P2K1 1620 aa5.96□□□□□ -1.45
HMGB1P18-201ENST00000438801 KIAA1324LA8MWY0 1029 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 BEND4Q6ZU67 534 aa5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 GJD3Q8N144 294 aa5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 ASAP3Q8TDY4 903 aa5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 BHLHE41Q9C0J9 482 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 ANO2Q9NQ90 1003 aa5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 AMOTL2Q9Y2J4 779 aa5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 HIF3AQ9Y2N7 669 aa5.96□□□□□ -1.46
HMGB1P18-201ENST00000438801 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 GRIK1P39086 918 aa5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 ZNF211Q13398 564 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 PEAR1Q5VY43 1037 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 SOX17Q9H6I2 414 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 ZFYVE28Q9HCC9 887 aa5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 LATS2Q9NRM7 1088 aa5.95□□□□□ -1.46
HMGB1P18-201ENST00000438801 LOC100289279A0A1B0GTE1 492 aa5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 PRR19A6NJB7 356 aa5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 GAS2O43903 313 aaKnown RBP5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 NUTM2GQ5VZR2 741 aa5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 INTS5Q6P9B9 1019 aaKnown RBP5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 SHKBP1Q8TBC3 707 aa5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 USP26Q9BXU7 913 aa5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 TMPRSS13Q9BYE2 586 aa5.94□□□□□ -1.46
HMGB1P18-201ENST00000438801 SPATA31D1Q6ZQQ2 1576 aa5.93□□□□□ -1.46
HMGB1P18-201ENST00000438801 POLR3DP05423 398 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P18-201ENST00000438801 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P18-201ENST00000438801 C12orf50Q8NA57 414 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P18-201ENST00000438801 CYP4F12Q9HCS2 524 aa5.93□□□□□ -1.46
HMGB1P18-201ENST00000438801 METTL12A8MUP2 240 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 DLGAP3O95886 979 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 SPINK2P20155 84 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 MAP4P27816 1152 aaKnown RBP5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 GSTM4Q03013 218 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 SGO2Q562F6 1265 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 MCTP1Q6DN14 999 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 SMG8Q8ND04 991 aaKnown RBP5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 SUGCTQ9HAC7 445 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 EGFL7Q9UHF1 273 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 USTQ9Y2C2 406 aa5.92□□□□□ -1.46
HMGB1P18-201ENST00000438801 ERCC6Q03468 1493 aa5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 WDR64B1ANS9 1081 aa5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 ICMTO60725 284 aa5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 TIAF1O95411 115 aa5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 RXRBP28702 533 aa5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 GP2P55259 537 aaKnown RBP5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 EXOSC6Q5RKV6 272 aaKnown RBP5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 MFSD14AQ96MC6 490 aa5.91□□□□□ -1.46
HMGB1P18-201ENST00000438801 COL17A1Q9UMD9 1497 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 A0A096LPE4 126 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 A0A1W2PPZ6 126 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 EIF4EBP3O60516 100 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 DRD2P14416 443 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 B4GALNT3Q6L9W6 998 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 DTX1Q86Y01 620 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 CCNJLQ8IV13 435 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 GALNT12Q8IXK2 581 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 BRPF3Q9ULD4 1205 aa5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 OAS3Q9Y6K5 1087 aaKnown RBP5.9□□□□□ -1.46
HMGB1P18-201ENST00000438801 A0A1W2PP55 124 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 H3BRB1 525 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 ADAMTS4O75173 837 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 GRIA4P48058 902 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 SERPINB4P48594 390 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 IRAK1P51617 712 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 PCDH1Q08174 1060 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 ZNF423Q2M1K9 1284 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 C14orf37Q86TY3 774 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 GLYCTKQ8IVS8 523 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 TCF12Q99081 682 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 NRSN2Q9GZP1 204 aa5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 CLEC4MQ9H2X3 399 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 TUT1Q9H6E5 874 aaKnown RBP5.89□□□□□ -1.47
HMGB1P18-201ENST00000438801 LIN7BQ9HAP6 207 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms