RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	GPHN	Q9NQX3	736 aa	Predicted RBP	18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	BCL9	O00512	1426 aa		18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CTSW	P56202	376 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ANTXR2	P58335	489 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	SNW1	Q13573	536 aa	Known RBP	18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	SYNE4	Q8N205	404 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	GOLPH3L	Q9H4A5	285 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	HPS5	Q9UPZ3	1129 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	LRP5	O75197	1615 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PRC1	O43663	620 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CYP19A1	P11511	503 aa	Predicted RBP	18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	MCAM	P43121	646 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ZNF165	P49910	485 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PI16	Q6UXB8	463 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CCAR1	Q8IX12	1150 aa	Known RBP	18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	RGS22	Q8NE09	1264 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PRIMPOL	Q96LW4	560 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	SLC4A9	Q96Q91	983 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	GREM2	Q9H772	168 aa		18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.84	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	GPAA1	O43292	621 aa		18.83	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ITGA6	P23229	1130 aa		18.83	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	FOSB	P53539	338 aa		18.83	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	METTL24	Q5JXM2	366 aa		18.83	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.83	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PYCARD	Q9ULZ3	195 aa		18.83	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ADD2	P35612	726 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ZNF75D	P51815	510 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	HAND2	P61296	217 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	CEBPZ	Q03701	1054 aa	Known RBP	18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	IQCB1	Q15051	598 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	LDHAL6A	Q6ZMR3	332 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	NCOA7	Q8NI08	942 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	DNAJC25	Q9H1X3	360 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	RTEL1	Q9NZ71	1219 aa		18.83	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ANKRD18B	A2A2Z9	1011 aa		18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	FAM160A1	Q05DH4	1040 aa		18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	SPC24	Q8NBT2	197 aa		18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	MYRIP	Q8NFW9	859 aa		18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PDCL3	Q9H2J4	239 aa		18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	MYH3	P11055	1940 aa		18.82	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	DHX16	O60231	1041 aa	Known RBP	18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ZSCAN25	Q6NSZ9	544 aa		18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	NBPF3	Q9H094	633 aa		18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	GPT	P24298	496 aa		18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	TTF1	Q15361	905 aa	Predicted RBP	18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	SARM1	Q6SZW1	724 aa		18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	CCDC73	Q6ZRK6	1079 aa		18.81	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PLCH1	Q4KWH8	1693 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	KLF18	A0A0U1RQI7	1052 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145		A0A1W2PQ27	194 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145		A0A1W2PQ64	194 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145		A0A1W2PQD8	194 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ERVV-1	B6SEH8	477 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	IRS4	O14654	1257 aa	Predicted RBP	18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ZNF213	O14771	459 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	CDC25B	P30305	580 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	GUCY1B3	Q02153	619 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	UBE3C	Q15386	1083 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	STX1A	Q16623	288 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	FBXO18	Q8NFZ0	1043 aa		18.8	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	GOLGA8B	A8MQT2	603 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PDE8B	O95263	885 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PTGS1	P23219	599 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ARID4A	P29374	1257 aa	Predicted RBP	18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	C4A	P0C0L4	1744 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	C4B	P0C0L5	1744 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PDE8A	O60658	829 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	RALYL	Q86SE5	291 aa	Known RBP	18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PIH1D3	Q9NQM4	214 aa	Known RBP	18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	BTG4	Q9NY30	223 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ZBTB1	Q9Y2K1	713 aa		18.79	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ARAP2	Q8WZ64	1704 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	KIN	O60870	393 aa	Known RBP	18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ADAL	Q6DHV7	355 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	FSIP1	Q8NA03	581 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	LINC00301	Q8NCQ3	95 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	C8orf76	Q96K31	380 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	MAP7D2	Q96T17	732 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	CNNM1	Q9NRU3	951 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	POLR3E	Q9NVU0	708 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PCDHA7	Q9UN72	937 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	COL14A1	Q05707	1796 aa	Known RBP	18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	PPFIA3	O75145	1194 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	YEATS4	O95619	227 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ME1	P48163	572 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	BRAP	Q7Z569	592 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	TRIM5	Q9C035	493 aa		18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	ORC3	Q9UBD5	711 aa	Predicted RBP	18.78	■□□□□ 0.6
HLA-DQB2-231	ENST00000435145	NUP98	P52948	1817 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms