RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
FN1-209ENST00000432072 MRVI1Q9Y6F6 885 aa11.33□□□□□ -0.6
FN1-209ENST00000432072 DNA2P51530 1060 aa11.33□□□□□ -0.6
FN1-209ENST00000432072 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
FN1-209ENST00000432072 TSHZ3Q63HK5 1081 aa11.33□□□□□ -0.6
FN1-209ENST00000432072 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
FN1-209ENST00000432072 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
FN1-209ENST00000432072 CWF19L2Q2TBE0 894 aaKnown RBP11.32□□□□□ -0.6
FN1-209ENST00000432072 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 DKC1O60832 514 aaKnown RBP eCLIP11.32□□□□□ -0.62e-32■□□□□ 9.9
FN1-209ENST00000432072 GOLGA1Q92805 767 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 CCDC113Q9H0I3 377 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 NEO1Q92859 1461 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 TMCO5BA8MYB1 307 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 FAM193AP78312 1265 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 GTF2IP78347 998 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 A1BGP04217 495 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 KRT2P35908 639 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 SMTNP53814 917 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 DYDC1Q8WWB3 177 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 CTAGE5O15320 804 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 HARSP12081 509 aaKnown RBP11.32□□□□□ -0.6
FN1-209ENST00000432072 FSIP1Q8NA03 581 aa11.32□□□□□ -0.6
FN1-209ENST00000432072 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
FN1-209ENST00000432072 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
FN1-209ENST00000432072 SBNO2Q9Y2G9 1366 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 UQCRHP07919 91 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 GAS8O95995 478 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 TFCP2Q12800 502 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 HS2ST1Q7LGA3 356 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 LUZP1Q86V48 1076 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 STRN3Q13033 797 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 PLVAPQ9BX97 442 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 USH1GQ495M9 461 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
FN1-209ENST00000432072 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
FN1-209ENST00000432072 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
FN1-209ENST00000432072 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
FN1-209ENST00000432072 SLC1A4P43007 532 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 DPP9Q86TI2 863 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 YEATS4O95619 227 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 RRAGBQ5VZM2 374 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 RNF34Q969K3 372 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 PPFIA3O75145 1194 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 FNBP1Q96RU3 617 aa11.3□□□□□ -0.6
FN1-209ENST00000432072 EDC4Q6P2E9 1401 aaKnown RBP11.3□□□□□ -0.6
FN1-209ENST00000432072 DNMT1P26358 1616 aaKnown RBP11.29□□□□□ -0.6
FN1-209ENST00000432072 CCDC169A6NNP5 214 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 OSBPP22059 807 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
FN1-209ENST00000432072 FAM193BQ96PV7 902 aaPredicted RBP11.29□□□□□ -0.6
FN1-209ENST00000432072 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
FN1-209ENST00000432072 MEIS3Q99687 375 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 TCP10L2B9ZVM9 353 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 TAF5LO75529 589 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 FERP16591 822 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 METTL13Q8N6R0 699 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 PLXNC1O60486 1568 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 LRRC2Q9BYS8 371 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 GOLGA6L7A0A1B0GV03 622 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 KIF5CO60282 957 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
FN1-209ENST00000432072 PIK3C2GO75747 1445 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 RAD50Q92878 1312 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 IKBKGQ9Y6K9 419 aa11.29□□□□□ -0.6
FN1-209ENST00000432072 ERLIN1O75477 346 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 GJB2P29033 226 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 MCM7P33993 719 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 ARHGEF16Q5VV41 709 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 ISM2Q6H9L7 571 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 RNF113AO15541 343 aaKnown RBP11.28□□□□□ -0.6
FN1-209ENST00000432072 AFMP43652 599 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 SMC1AQ14683 1233 aaKnown RBP11.28□□□□□ -0.6
FN1-209ENST00000432072 NCAPG2Q86XI2 1143 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 SREK1Q8WXA9 508 aaKnown RBP11.28□□□□□ -0.6
FN1-209ENST00000432072 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 ARID5AQ03989 594 aa11.28□□□□□ -0.6
FN1-209ENST00000432072 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
FN1-209ENST00000432072 MAK16Q9BXY0 300 aaKnown RBP11.28□□□□□ -0.6
FN1-209ENST00000432072 CHMP2AO43633 222 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms