RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 QSER1Q2KHR3 1735 aa26.46■■□□□ 1.83
VSX1-205ENST00000429762 A0A0G2JLW4 131 aa26.46■■□□□ 1.83
VSX1-205ENST00000429762 IRS2Q9Y4H2 1338 aa26.46■■□□□ 1.83
VSX1-205ENST00000429762 HSPD1P10809 573 aaKnown RBP26.46■■□□□ 1.83
VSX1-205ENST00000429762 ZSCAN25Q6NSZ9 544 aa26.46■■□□□ 1.83
VSX1-205ENST00000429762 MAGEB6Q8N7X4 407 aa26.46■■□□□ 1.83
VSX1-205ENST00000429762 U3KPZ7 1027 aaPredicted RBP26.46■■□□□ 1.83
VSX1-205ENST00000429762 XDHP47989 1333 aa26.45■■□□□ 1.82
VSX1-205ENST00000429762 ZKSCAN1P17029 563 aaPredicted RBP26.45■■□□□ 1.82
VSX1-205ENST00000429762 CRAMP1Q96RY5 1269 aa26.45■■□□□ 1.82
VSX1-205ENST00000429762 TCRBV5S4A2TA0A5A2 114 aa26.44■■□□□ 1.82
VSX1-205ENST00000429762 HIBADHP31937 336 aaKnown RBP26.44■■□□□ 1.82
VSX1-205ENST00000429762 NSFL1CQ9UNZ2 370 aaKnown RBP26.44■■□□□ 1.82
VSX1-205ENST00000429762 JAG2Q9Y219 1238 aa26.44■■□□□ 1.82
VSX1-205ENST00000429762 MYH13Q9UKX3 1938 aa26.44■■□□□ 1.82
VSX1-205ENST00000429762 GPAA1O43292 621 aa26.44■■□□□ 1.82
VSX1-205ENST00000429762 HSP90AA1P07900 732 aaKnown RBP26.44■■□□□ 1.82
VSX1-205ENST00000429762 ABCF2Q9UG63 623 aa26.44■■□□□ 1.82
VSX1-205ENST00000429762 FOXP2O15409 715 aa26.43■■□□□ 1.82
VSX1-205ENST00000429762 FRAT2O75474 233 aaPredicted RBP26.43■■□□□ 1.82
VSX1-205ENST00000429762 SRGNP10124 158 aa26.43■■□□□ 1.82
VSX1-205ENST00000429762 MAP3K12Q12852 859 aa26.43■■□□□ 1.82
VSX1-205ENST00000429762 LARP6Q9BRS8 491 aaKnown RBP26.43■■□□□ 1.82
VSX1-205ENST00000429762 DSCC1Q9BVC3 393 aa26.43■■□□□ 1.82
VSX1-205ENST00000429762 LRP2BPQ9P2M1 347 aa26.43■■□□□ 1.82
VSX1-205ENST00000429762 PPEF1O14829 653 aaPredicted RBP26.42■■□□□ 1.82
VSX1-205ENST00000429762 UBE3CQ15386 1083 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 RNF20Q5VTR2 975 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 CACNA1SQ13698 1873 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 BBOX1O75936 387 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 UFL1O94874 794 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 CYP21A2P08686 494 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 CHAF1AQ13111 956 aaPredicted RBP26.42■■□□□ 1.82
VSX1-205ENST00000429762 TTLL5Q6EMB2 1281 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 LEMD3Q9Y2U8 911 aa26.42■■□□□ 1.82
VSX1-205ENST00000429762 DENND2AQ9ULE3 1009 aa26.41■■□□□ 1.82
VSX1-205ENST00000429762 RPAP1Q9BWH6 1393 aaPredicted RBP26.41■■□□□ 1.82
VSX1-205ENST00000429762 PDE6BP35913 854 aa26.4■■□□□ 1.82
VSX1-205ENST00000429762 TTC14Q96N46 770 aa26.4■■□□□ 1.82
VSX1-205ENST00000429762 NPR1P16066 1061 aa26.4■■□□□ 1.82
VSX1-205ENST00000429762 ZSWIM6Q9HCJ5 1215 aa26.4■■□□□ 1.82
VSX1-205ENST00000429762 LRRC37AA6NMS7 1700 aa26.4■■□□□ 1.82
VSX1-205ENST00000429762 AK2P54819 239 aa26.39■■□□□ 1.82
VSX1-205ENST00000429762 TCEANC2Q96MN5 208 aa26.39■■□□□ 1.82
VSX1-205ENST00000429762 RAI14Q9P0K7 980 aa26.39■■□□□ 1.82
VSX1-205ENST00000429762 ZNF622Q969S3 477 aaKnown RBP eCLIP26.38■■□□□ 1.81
VSX1-205ENST00000429762 TMX3Q96JJ7 454 aa26.38■■□□□ 1.81
VSX1-205ENST00000429762 GGA1Q9UJY5 639 aa26.38■■□□□ 1.81
VSX1-205ENST00000429762 C2CD5Q86YS7 1000 aa26.38■■□□□ 1.81
VSX1-205ENST00000429762 TM6SF1Q9BZW5 370 aa26.38■■□□□ 1.81
VSX1-205ENST00000429762 CYP46A1Q9Y6A2 500 aa26.38■■□□□ 1.81
VSX1-205ENST00000429762 STOX1Q6ZVD7 989 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 PDRG1Q9NUG6 133 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 POLLQ9UGP5 575 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 MBD4O95243 580 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 ATP2B4P23634 1241 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 NBR1Q14596 966 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 RUFY3Q7L099 469 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 ADGRA1Q86SQ6 560 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 ARMT1Q9H993 441 aa26.37■■□□□ 1.81
VSX1-205ENST00000429762 CHRNA5P30532 468 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 HAND2P61296 217 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 ILDR1Q86SU0 546 aaPredicted RBP26.36■■□□□ 1.81
VSX1-205ENST00000429762 MIGA1Q8NAN2 632 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 TBC1D16Q8TBP0 767 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 AIDAQ96BJ3 306 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 MASTLQ96GX5 879 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 LTBP1Q14766 1721 aa26.36■■□□□ 1.81
VSX1-205ENST00000429762 SEMA3EO15041 775 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 CYP7A1P22680 504 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 ZGPATQ8N5A5 531 aaKnown RBP26.35■■□□□ 1.81
VSX1-205ENST00000429762 DDIT3P35638 169 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 MCM2P49736 904 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 TSGA10IPQ3SY00 556 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 BLOC1S2Q6QNY1 142 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 SP8Q8IXZ3 490 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 ATP6V0A2Q9Y487 856 aa26.35■■□□□ 1.81
VSX1-205ENST00000429762 C6orf229H3BNL8 230 aa26.34■■□□□ 1.81
VSX1-205ENST00000429762 FGAP02671 866 aa26.34■■□□□ 1.81
VSX1-205ENST00000429762 PSMA5P28066 241 aa26.34■■□□□ 1.81
VSX1-205ENST00000429762 LAMA4Q16363 1823 aa26.34■■□□□ 1.81
VSX1-205ENST00000429762 STRBPQ96SI9 672 aaKnown RBP26.34■■□□□ 1.81
VSX1-205ENST00000429762 ZNF804AQ7Z570 1209 aa26.33■■□□□ 1.81
VSX1-205ENST00000429762 LCORLQ8N3X6 602 aa26.33■■□□□ 1.81
VSX1-205ENST00000429762 ZNF384Q8TF68 577 aa26.33■■□□□ 1.81
VSX1-205ENST00000429762 PODXL2Q9NZ53 605 aa26.33■■□□□ 1.81
VSX1-205ENST00000429762 APPP05067 770 aa26.33■■□□□ 1.8
VSX1-205ENST00000429762 RPS6KB1P23443 525 aa26.32■■□□□ 1.8
VSX1-205ENST00000429762 NEK1Q96PY6 1258 aa26.32■■□□□ 1.8
VSX1-205ENST00000429762 ZNF219Q9P2Y4 722 aaPredicted RBP26.32■■□□□ 1.8
VSX1-205ENST00000429762 PRKAB2O43741 272 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 PRDX5P30044 214 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 ALDH1B1P30837 517 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 KRT32Q14532 448 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 CHMP5Q9NZZ3 219 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 H0YIN7 160 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 RIMBP2O15034 1052 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 LARGE1O95461 756 aa26.31■■□□□ 1.8
VSX1-205ENST00000429762 C15orf52Q6ZUT6 534 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms