RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 XAGE2Q96GT9 111 aa15.87■□□□□ 0.13
SENP3-202ENST00000429205 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
SENP3-202ENST00000429205 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
SENP3-202ENST00000429205 NRDCO43847 1150 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 CHGBP05060 677 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 SEC31BQ9NQW1 1179 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
SENP3-202ENST00000429205 SCN7AQ01118 1682 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 ST18O60284 1047 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 TNNT3P45378 269 aaPredicted RBP15.86■□□□□ 0.13
SENP3-202ENST00000429205 NEK4P51957 841 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 VGLL2Q8N8G2 317 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
SENP3-202ENST00000429205 IL17RAQ96F46 866 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
SENP3-202ENST00000429205 IFIT1P09914 478 aaKnown RBP15.85■□□□□ 0.13
SENP3-202ENST00000429205 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
SENP3-202ENST00000429205 GORABQ5T7V8 394 aa15.85■□□□□ 0.13
SENP3-202ENST00000429205 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
SENP3-202ENST00000429205 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
SENP3-202ENST00000429205 C4BP0C0L5 1744 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 ZPR1O75312 459 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 TRIM37O94972 964 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 SLFN14P0C7P3 912 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 CCDC152Q4G0S7 254 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 FAM196AQ6ZSG2 479 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 KBTBD3Q8NAB2 608 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 ARHGEF1Q92888 912 aaKnown RBP15.84■□□□□ 0.13
SENP3-202ENST00000429205 SNRKQ9NRH2 765 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 RGL2O15211 777 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 SWT1Q5T5J6 900 aaKnown RBP15.84■□□□□ 0.13
SENP3-202ENST00000429205 RPAINQ86UA6 219 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 ZNF589Q86UQ0 364 aaPredicted RBP15.84■□□□□ 0.13
SENP3-202ENST00000429205 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 CCDC171Q6TFL3 1326 aa15.84■□□□□ 0.13
SENP3-202ENST00000429205 PDE8BO95263 885 aa15.83■□□□□ 0.13
SENP3-202ENST00000429205 TRDNQ13061 729 aa15.83■□□□□ 0.13
SENP3-202ENST00000429205 SKOR2Q2VWA4 1001 aaPredicted RBP15.83■□□□□ 0.13
SENP3-202ENST00000429205 TTC39AQ5SRH9 613 aa15.83■□□□□ 0.13
SENP3-202ENST00000429205 HELBQ8NG08 1087 aaPredicted RBP15.83■□□□□ 0.13
SENP3-202ENST00000429205 UPF3BQ9BZI7 483 aaKnown RBP15.83■□□□□ 0.13
SENP3-202ENST00000429205 NBPF3Q9H094 633 aa15.83■□□□□ 0.13
SENP3-202ENST00000429205 SNX14Q9Y5W7 946 aa15.83■□□□□ 0.13
SENP3-202ENST00000429205 MED23Q9ULK4 1368 aa15.83■□□□□ 0.12
SENP3-202ENST00000429205 ARID4AP29374 1257 aaPredicted RBP15.83■□□□□ 0.12
SENP3-202ENST00000429205 MTA1Q13330 715 aa15.83■□□□□ 0.12
SENP3-202ENST00000429205 TSHZ1Q6ZSZ6 1077 aa15.83■□□□□ 0.12
SENP3-202ENST00000429205 C3orf67Q6ZVT6 689 aa15.83■□□□□ 0.12
SENP3-202ENST00000429205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.83■□□□□ 0.12
SENP3-202ENST00000429205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.12
SENP3-202ENST00000429205 RFX7Q2KHR2 1363 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 SCARF1Q14162 830 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 ZNF710Q8N1W2 664 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 SGSM3Q96HU1 749 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 MPHOSPH8Q99549 860 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 MRVI1Q9Y6F6 885 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 LAMB2P55268 1798 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 PPP1R12AO14974 1030 aaPredicted RBP15.82■□□□□ 0.12
SENP3-202ENST00000429205 FKBP4Q02790 459 aaKnown RBP eCLIP15.82■□□□□ 0.12
SENP3-202ENST00000429205 ZNF772Q68DY9 489 aaPredicted RBP15.82■□□□□ 0.12
SENP3-202ENST00000429205 PRPF40BQ6NWY9 871 aaKnown RBP15.82■□□□□ 0.12
SENP3-202ENST00000429205 MAP4K1Q92918 833 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
SENP3-202ENST00000429205 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
SENP3-202ENST00000429205 MROH5Q6ZUA9 1318 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 RTL9Q8NET4 1388 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 LRP5O75197 1615 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 SLFNL1Q499Z3 407 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 ANKRD23Q86SG2 305 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
SENP3-202ENST00000429205 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
SENP3-202ENST00000429205 RBM8AQ9Y5S9 174 aaKnown RBP15.81■□□□□ 0.12
SENP3-202ENST00000429205 SPEF2Q9C093 1822 aa15.81■□□□□ 0.12
SENP3-202ENST00000429205 DHX16O60231 1041 aaKnown RBP15.8■□□□□ 0.12
SENP3-202ENST00000429205 RBM6P78332 1123 aaKnown RBP15.8■□□□□ 0.12
SENP3-202ENST00000429205 RAB3GAP1Q15042 981 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 NECTIN1Q15223 517 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 PI16Q6UXB8 463 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 ZKSCAN5Q9Y2L8 839 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 ABCC12Q96J65 1359 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 KLHL33A6NCF5 533 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 SNAP23O00161 211 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 TAF5LO75529 589 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 RFC4P35249 363 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 IGHMBP2P38935 993 aaKnown RBP15.8■□□□□ 0.12
SENP3-202ENST00000429205 PUM3Q15397 648 aaKnown RBP15.8■□□□□ 0.12
SENP3-202ENST00000429205 CCDC129Q6ZRS4 1044 aa15.8■□□□□ 0.12
SENP3-202ENST00000429205 FGFR2P21802 821 aa15.79■□□□□ 0.12
SENP3-202ENST00000429205 TDO2P48775 406 aa15.79■□□□□ 0.12
SENP3-202ENST00000429205 ZAP70P43403 619 aa15.79■□□□□ 0.12
SENP3-202ENST00000429205 SF3B3Q15393 1217 aaKnown RBP15.79■□□□□ 0.12
SENP3-202ENST00000429205 MCMDC2Q4G0Z9 681 aa15.79■□□□□ 0.12
SENP3-202ENST00000429205 CCDC24Q8N4L8 307 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms