RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 KIF28PB7ZC32 967 aa14.49□□□□□ -0.09
CDH3-202ENST00000429102 FGAP02671 866 aa14.49□□□□□ -0.09
CDH3-202ENST00000429102 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
CDH3-202ENST00000429102 PUS7LQ9H0K6 701 aaKnown RBP14.49□□□□□ -0.09
CDH3-202ENST00000429102 OGFRQ9NZT2 677 aa14.49□□□□□ -0.09
CDH3-202ENST00000429102 CTIFO43310 598 aaKnown RBP14.48□□□□□ -0.09
CDH3-202ENST00000429102 RFX5P48382 616 aaPredicted RBP14.48□□□□□ -0.09
CDH3-202ENST00000429102 CCZ1BP86790 482 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 CCZ1P86791 482 aaPredicted RBP14.48□□□□□ -0.09
CDH3-202ENST00000429102 KLHL10Q6JEL2 608 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 DPF2Q92785 391 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 SENP2Q9HC62 589 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 ARHGAP29Q52LW3 1261 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 TRMT44Q8IYL2 757 aaKnown RBP14.48□□□□□ -0.09
CDH3-202ENST00000429102 MNS1Q8NEH6 495 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 hCG_1642624A0A1W2PR95 340 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 IMMTQ16891 758 aaKnown RBP14.48□□□□□ -0.09
CDH3-202ENST00000429102 KIAA1468Q9P260 1216 aa14.48□□□□□ -0.09
CDH3-202ENST00000429102 RGPD8O14715 1765 aaPredicted RBP14.47□□□□□ -0.09
CDH3-202ENST00000429102 FOXN1O15353 648 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
CDH3-202ENST00000429102 PHKG2P15735 406 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 CCDC158Q5M9N0 1113 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 IFNL2Q8IZJ0 200 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 IQSEC3Q9UPP2 1182 aaPredicted RBP14.47□□□□□ -0.09
CDH3-202ENST00000429102 TMEM232C9JQI7 657 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 ZNF213O14771 459 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 CYP27B1O15528 508 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 SEC31AO94979 1220 aaKnown RBP14.47□□□□□ -0.09
CDH3-202ENST00000429102 SLU7O95391 586 aaKnown RBP14.47□□□□□ -0.09
CDH3-202ENST00000429102 UBASH3AP57075 661 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 TRDNQ13061 729 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 NKX2-3Q8TAU0 364 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 CARMIL3Q8ND23 1372 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 B4E1Z4 1266 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 GRAMD1CQ8IYS0 662 aa14.47□□□□□ -0.09
CDH3-202ENST00000429102 NRDCO43847 1150 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 PFKFB1P16118 471 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 TPM4P67936 248 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 KARSQ15046 597 aaKnown RBP14.46□□□□□ -0.09
CDH3-202ENST00000429102 CCDC34Q96HJ3 373 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 CWC25Q9NXE8 425 aaPredicted RBP14.46□□□□□ -0.09
CDH3-202ENST00000429102 CTAGE5O15320 804 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 SYKP43405 635 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 E4F1Q66K89 784 aaPredicted RBP14.46□□□□□ -0.09
CDH3-202ENST00000429102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.46□□□□□ -0.09
CDH3-202ENST00000429102 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
CDH3-202ENST00000429102 FANCCQ00597 558 aa14.46□□□□□ -0.1
CDH3-202ENST00000429102 LINC00301Q8NCQ3 95 aa14.46□□□□□ -0.1
CDH3-202ENST00000429102 NUP133Q8WUM0 1156 aa14.46□□□□□ -0.1
CDH3-202ENST00000429102 DESI2Q9BSY9 194 aa14.46□□□□□ -0.1
CDH3-202ENST00000429102 NBPF26B4DH59 902 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 WDHD1O75717 1129 aaPredicted RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 ADKP55263 362 aaKnown RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 NBPF14Q5TI25 921 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 USPL1Q5W0Q7 1092 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 NBPF11Q86T75 865 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 FMR1NBQ8N0W7 255 aaPredicted RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 NBPF15Q8N660 670 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 XAGE2Q96GT9 111 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 CARD6Q9BX69 1037 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 GTPBP4Q9BZE4 634 aaKnown RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 TEX35Q5T0J7 233 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 TOM1L2Q6ZVM7 507 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 ATG9AQ7Z3C6 839 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 MRFAP1L1Q96HT8 127 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 PPP1R13BQ96KQ4 1090 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 ZCCHC17Q9NP64 241 aaKnown RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 DIP2BQ9P265 1576 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 STX17P56962 302 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 METTL24Q5JXM2 366 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 SLC9C2Q5TAH2 1124 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 NAA16Q6N069 864 aaPredicted RBP14.45□□□□□ -0.1
CDH3-202ENST00000429102 KRT222Q8N1A0 295 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 ENGASEQ8NFI3 743 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 UBXN4Q92575 508 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 KCNJ14Q9UNX9 436 aa14.45□□□□□ -0.1
CDH3-202ENST00000429102 GYS2P54840 703 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 STAMQ92783 540 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 SLC26A6Q9BXS9 759 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 CNNM1Q9NRU3 951 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 FANCLQ9NW38 375 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 SRCAPQ6ZRS2 3230 aa14.44□□□□□ -0.1
CDH3-202ENST00000429102 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
CDH3-202ENST00000429102 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
CDH3-202ENST00000429102 EYA2O00167 538 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 GPAA1O43292 621 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 ANO1Q5XXA6 986 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 ADALQ6DHV7 355 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 RBM43Q6ZSC3 357 aaKnown RBP14.43□□□□□ -0.1
CDH3-202ENST00000429102 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
CDH3-202ENST00000429102 XRN1Q8IZH2 1706 aaKnown RBP14.43□□□□□ -0.1
CDH3-202ENST00000429102 DIP2AQ14689 1571 aa14.43□□□□□ -0.1
CDH3-202ENST00000429102 CASP1P29466 404 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms