RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 DUSP9Q99956 384 aaKnown RBP3.95□□□□□ -1.78
RGPD1-203ENST00000428128 NGRNQ9NPE2 291 aaKnown RBP3.95□□□□□ -1.78
RGPD1-203ENST00000428128 SNTG2Q9NY99 539 aa3.95□□□□□ -1.78
RGPD1-203ENST00000428128 AK5Q9Y6K8 562 aa3.95□□□□□ -1.78
RGPD1-203ENST00000428128 CBFA2T2O43439 604 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 MYL1P05976 194 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 CLDN10P78369 228 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 RAB33AQ14088 237 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 MAP7D1Q3KQU3 841 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 GJC2Q5T442 439 aaPredicted RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 CKAP2LQ8IYA6 745 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 PTCD2Q8WV60 388 aaKnown RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 KLF15Q9UIH9 416 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 SYNPO2Q9UMS6 1093 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 PLIN1O60240 522 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 CDC45O75419 566 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 DNAJA1P31689 397 aaKnown RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 ST13P50502 369 aaKnown RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 C1QTNF8P60827 252 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 ZNF211Q13398 564 aaPredicted RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 ZNF772Q68DY9 489 aaPredicted RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 BRINP3Q76B58 766 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 FBF1Q8TES7 1133 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 CRELD1Q96HD1 420 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 LDHBP07195 334 aaKnown RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 NBPF20Q3BBV1 942 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 HYIQ5T013 277 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 C1QTNF12Q5T7M4 302 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 ERAP2Q6P179 960 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 SPICE1Q8N0Z3 855 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 TRMT2BQ96GJ1 504 aaKnown RBP3.94□□□□□ -1.78
RGPD1-203ENST00000428128 CLIC5Q9NZA1 410 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 NOD1Q9Y239 953 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 SYNRGQ9UMZ2 1314 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 WASHC2CQ9Y4E1 1318 aa3.94□□□□□ -1.78
RGPD1-203ENST00000428128 POTEB3A0JP26 581 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 SEC13P55735 322 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 MCL1Q07820 350 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 DPYDQ12882 1025 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 SAFB2Q14151 953 aaKnown RBP eCLIP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 POTEBQ6S5H4 581 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 HOMER1Q86YM7 354 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 MICALL2Q8IY33 904 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 TCEAL8Q8IYN2 117 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 PGBD3Q8N328 593 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 LILRB2Q8N423 598 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 MSL3Q8N5Y2 521 aaKnown RBP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 KCNQ5Q9NR82 932 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 RNF19AQ9NV58 838 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 CWC25Q9NXE8 425 aaPredicted RBP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 STRIP2Q9ULQ0 834 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 PCDHGC3Q9UN70 934 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 FRMD4BQ9Y2L6 1034 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ANKARQ7Z5J8 1434 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ALG1L2C9J202 215 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 FAM13AO94988 1023 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ERBB3P21860 1342 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 CDC27P30260 824 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 PLCB3Q01970 1234 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 EHHADHQ08426 723 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 PDE3BQ13370 1112 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 RC3H1Q5TC82 1133 aaKnown RBP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ALG1LQ6GMV1 187 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ATAD2Q6PL18 1390 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 CASC1Q6TDU7 716 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 LRRN4Q8WUT4 740 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ZNF669Q96BR6 464 aaPredicted RBP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 CDC5LQ99459 802 aaKnown RBP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 FEZ1Q99689 392 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ADGRL3Q9HAR2 1447 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 CLSPNQ9HAW4 1339 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 RFPL1O75677 317 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 CASP7P55210 303 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 FAM193AP78312 1265 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 PURAQ00577 322 aaKnown RBP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 FERMT3Q86UX7 667 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 TEX19Q8NA77 164 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 SH3TC2Q8TF17 1288 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ZNF622Q969S3 477 aaKnown RBP eCLIP3.93□□□□□ -1.78
RGPD1-203ENST00000428128 ERP27Q96DN0 273 aa3.93□□□□□ -1.78
RGPD1-203ENST00000428128 FZD6O60353 706 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 SOX9P48436 509 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
RGPD1-203ENST00000428128 DESI1Q6ICB0 168 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 C16orf86Q6ZW13 317 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 TSR2Q969E8 191 aaKnown RBP3.92□□□□□ -1.78
RGPD1-203ENST00000428128 CSRNP2Q9H175 543 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 SLKQ9H2G2 1235 aaPredicted RBP3.92□□□□□ -1.78
RGPD1-203ENST00000428128 KANSL2Q9H9L4 492 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 POLG2Q9UHN1 485 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 NINLQ9Y2I6 1382 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 ZNF335Q9H4Z2 1342 aaPredicted RBP3.92□□□□□ -1.78
RGPD1-203ENST00000428128 TOGARAM1Q9Y4F4 1720 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 E2F8A0AVK6 867 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 GOLGA6CA6NDK9 693 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 GOLGA6BA6NDN3 693 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 CFAP99D6REC4 459 aa3.92□□□□□ -1.78
RGPD1-203ENST00000428128 FMNL1O95466 1100 aaPredicted RBP3.92□□□□□ -1.78
RGPD1-203ENST00000428128 FOSP01100 380 aaPredicted RBP3.92□□□□□ -1.78
RGPD1-203ENST00000428128 GOLGA6DP0CG33 693 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms