RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 CLSTN2Q9H4D0 955 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 ACTN2P35609 894 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 RAPGEF1Q13905 1077 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 TEX11Q8IYF3 940 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 RNF34Q969K3 372 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 PAGR1Q9BTK6 254 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 USP21Q9UK80 565 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 MAPK8IP1Q9UQF2 711 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 MBD4O95243 580 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 KCNQ4P56696 695 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 CEP135Q66GS9 1140 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 CCDC102BQ68D86 513 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 ZGPATQ8N5A5 531 aaKnown RBP14.96□□□□□ -0.01
SPG11-202ENST00000427534 STX1AQ16623 288 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 LETM2Q2VYF4 491 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 RNF169Q8NCN4 708 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 TMOD4Q9NZQ9 345 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 PCDHB15Q9Y5E8 787 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 IKBKGQ9Y6K9 419 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 GCOM1H8Y6P7 765 aaPredicted RBP14.96□□□□□ -0.01
SPG11-202ENST00000427534 MYZAPP0CAP1 466 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
SPG11-202ENST00000427534 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.02
SPG11-202ENST00000427534 A2MP01023 1474 aa14.96□□□□□ -0.02
SPG11-202ENST00000427534 AKR1B10O60218 316 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 SMARCC1Q92922 1105 aaPredicted RBP14.95□□□□□ -0.02
SPG11-202ENST00000427534 ASXL2Q76L83 1435 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 SH3BP5O60239 455 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 A1BGP04217 495 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 ANO6Q4KMQ2 910 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 FSD2A1L4K1 749 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 RNASE9P60153 205 aaKnown RBP14.95□□□□□ -0.02
SPG11-202ENST00000427534 CTDSPL2Q05D32 466 aa14.95□□□□□ -0.02
SPG11-202ENST00000427534 CCDC66A2RUB6 948 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 KCNA6P17658 529 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 ITGA6P23229 1130 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 UBASH3AP57075 661 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 AOPEPQ8N6M6 819 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 MYL10Q9BUA6 226 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
SPG11-202ENST00000427534 CTR9Q6PD62 1173 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 CCDC25Q86WR0 208 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
SPG11-202ENST00000427534 FERP16591 822 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 DNM1Q05193 864 aaKnown RBP14.94□□□□□ -0.02
SPG11-202ENST00000427534 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 CCDC65Q8IXS2 484 aa14.94□□□□□ -0.02
SPG11-202ENST00000427534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPG11-202ENST00000427534 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPG11-202ENST00000427534 V9GYY5 206 aaPredicted RBP14.94□□□□□ -0.02
SPG11-202ENST00000427534 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 B4E1Z4 1266 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 CCNT1O60563 726 aaKnown RBP14.93□□□□□ -0.02
SPG11-202ENST00000427534 GCP02774 474 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 KRT2P35908 639 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 IFRD2Q12894 506 aaPredicted RBP14.93□□□□□ -0.02
SPG11-202ENST00000427534 TMX3Q96JJ7 454 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 IMPG2Q9BZV3 1241 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 KIAA0753Q2KHM9 967 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 POLKQ9UBT6 870 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 GNG11P61952 73 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 KARSQ15046 597 aaKnown RBP14.93□□□□□ -0.02
SPG11-202ENST00000427534 KSR2Q6VAB6 950 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 HMG20BQ9P0W2 317 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 H0YIN7 160 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 NDC80O14777 642 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 CTAGE5O15320 804 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 MXRA7P84157 204 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 BIRC3Q13489 604 aa14.93□□□□□ -0.02
SPG11-202ENST00000427534 DPP8Q6V1X1 898 aaPredicted RBP14.93□□□□□ -0.02
SPG11-202ENST00000427534 SHTN1A0MZ66 631 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 PSMC4P43686 418 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 UAP1Q16222 522 aaPredicted RBP14.92□□□□□ -0.02
SPG11-202ENST00000427534 FAM114A1Q8IWE2 563 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 ANKRD44Q8N8A2 993 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 CCDC114Q96M63 670 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 TRAPPC8Q9Y2L5 1435 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 PARP1P09874 1014 aaKnown RBP14.92□□□□□ -0.02
SPG11-202ENST00000427534 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
SPG11-202ENST00000427534 KIF18AQ8NI77 898 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 KIFC2Q96AC6 838 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
SPG11-202ENST00000427534 NOP56O00567 594 aaKnown RBP14.92□□□□□ -0.02
SPG11-202ENST00000427534 SF3A3Q12874 501 aaKnown RBP eCLIP14.92□□□□□ -0.023e-6■□□□□ 9.9
SPG11-202ENST00000427534 PPP1R21Q6ZMI0 780 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 TTLL3Q9Y4R7 772 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 DNAJC25Q9H1X3 360 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 ABL1P00519 1130 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 TCP10L2B9ZVM9 353 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 ZNF165P49910 485 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 PDE1AP54750 535 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 TESK2Q96S53 571 aa14.92□□□□□ -0.02
SPG11-202ENST00000427534 ERCC5P28715 1186 aaPredicted RBP14.91□□□□□ -0.02
SPG11-202ENST00000427534 TRIM6Q9C030 488 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms