RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
C9orf3-205ENST00000427193 UBASH3BQ8TF42 649 aa9.76□□□□□ -0.85
C9orf3-205ENST00000427193 C1orf115Q9H7X2 142 aa9.76□□□□□ -0.85
C9orf3-205ENST00000427193 SOX13Q9UN79 622 aa9.76□□□□□ -0.85
C9orf3-205ENST00000427193 PHACTR2O75167 634 aa9.75□□□□□ -0.85
C9orf3-205ENST00000427193 EDN3P14138 238 aa9.75□□□□□ -0.85
C9orf3-205ENST00000427193 ARL4DP49703 201 aa9.75□□□□□ -0.85
C9orf3-205ENST00000427193 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
C9orf3-205ENST00000427193 PHLDB3Q6NSJ2 640 aa9.75□□□□□ -0.85
C9orf3-205ENST00000427193 OSMRQ99650 979 aa9.75□□□□□ -0.85
C9orf3-205ENST00000427193 EREGO14944 169 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 TRPA1O75762 1119 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 ANKRD34AQ69YU3 496 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 NXPE3Q969Y0 559 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 MYRFLQ96LU7 910 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 HHIPQ96QV1 700 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 RNF208Q9H0X6 261 aa9.74□□□□□ -0.85
C9orf3-205ENST00000427193 RSF1Q96T23 1441 aaPredicted RBP9.73□□□□□ -0.85
C9orf3-205ENST00000427193 FZD6O60353 706 aa9.73□□□□□ -0.85
C9orf3-205ENST00000427193 C19orf57Q0VDD7 668 aa9.73□□□□□ -0.85
C9orf3-205ENST00000427193 SLC7A3Q8WY07 619 aa9.73□□□□□ -0.85
C9orf3-205ENST00000427193 ZKSCAN3Q9BRR0 538 aa9.73□□□□□ -0.85
C9orf3-205ENST00000427193 MROH2BQ7Z745 1585 aa9.72□□□□□ -0.85
C9orf3-205ENST00000427193 NLRP12P59046 1061 aa9.72□□□□□ -0.85
C9orf3-205ENST00000427193 PCMTD2Q9NV79 361 aa9.72□□□□□ -0.85
C9orf3-205ENST00000427193 SART1O43290 800 aaKnown RBP9.71□□□□□ -0.86
C9orf3-205ENST00000427193 CD97P48960 835 aa9.71□□□□□ -0.86
C9orf3-205ENST00000427193 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.71□□□□□ -0.86
C9orf3-205ENST00000427193 GJD3Q8N144 294 aa9.71□□□□□ -0.86
C9orf3-205ENST00000427193 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.86
C9orf3-205ENST00000427193 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.86
C9orf3-205ENST00000427193 FOXD3Q9UJU5 478 aaPredicted RBP9.71□□□□□ -0.86
C9orf3-205ENST00000427193 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
C9orf3-205ENST00000427193 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
C9orf3-205ENST00000427193 ABL1P00519 1130 aa9.7□□□□□ -0.86
C9orf3-205ENST00000427193 NFIAQ12857 509 aa9.7□□□□□ -0.86
C9orf3-205ENST00000427193 IKBKEQ14164 716 aa9.7□□□□□ -0.86
C9orf3-205ENST00000427193 VN1R5Q7Z5H4 357 aa9.7□□□□□ -0.86
C9orf3-205ENST00000427193 BHLHE41Q9C0J9 482 aaPredicted RBP9.7□□□□□ -0.86
C9orf3-205ENST00000427193 HIF3AQ9Y2N7 669 aa9.7□□□□□ -0.86
C9orf3-205ENST00000427193 MEGF11A6BM72 1044 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 SSTR4P31391 388 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 RNF43Q68DV7 783 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 FDX2Q6P4F2 183 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 CLEC10AQ8IUN9 316 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 TRIM42Q8IWZ5 723 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 FAM20CQ8IXL6 584 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 ARAP1Q96P48 1450 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 SOX17Q9H6I2 414 aaPredicted RBP9.69□□□□□ -0.86
C9orf3-205ENST00000427193 USTQ9Y2C2 406 aa9.69□□□□□ -0.86
C9orf3-205ENST00000427193 CARNS1A5YM72 827 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 SOX1O00570 391 aaPredicted RBP9.68□□□□□ -0.86
C9orf3-205ENST00000427193 PREPP48147 710 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
C9orf3-205ENST00000427193 ZDHHC13Q8IUH4 622 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 FAM83CQ9BQN1 747 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 DBNDD2Q9BQY9 259 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 CCDC87Q9NVE4 849 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 EGFL7Q9UHF1 273 aa9.68□□□□□ -0.86
C9orf3-205ENST00000427193 FANCD2Q9BXW9 1451 aa9.67□□□□□ -0.86
C9orf3-205ENST00000427193 HMX2A2RU54 273 aa9.67□□□□□ -0.86
C9orf3-205ENST00000427193 COBLO75128 1261 aa9.67□□□□□ -0.86
C9orf3-205ENST00000427193 TGFB1P01137 390 aa9.67□□□□□ -0.86
C9orf3-205ENST00000427193 BMP3P12645 472 aa9.67□□□□□ -0.86
C9orf3-205ENST00000427193 PEAR1Q5VY43 1037 aaPredicted RBP9.67□□□□□ -0.86
C9orf3-205ENST00000427193 ZFYVE28Q9HCC9 887 aa9.67□□□□□ -0.86
C9orf3-205ENST00000427193 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
C9orf3-205ENST00000427193 HGSNATQ68CP4 663 aa9.66□□□□□ -0.86
C9orf3-205ENST00000427193 C14orf37Q86TY3 774 aa9.66□□□□□ -0.86
C9orf3-205ENST00000427193 ASAP3Q8TDY4 903 aa9.66□□□□□ -0.86
C9orf3-205ENST00000427193 ANO2Q9NQ90 1003 aa9.66□□□□□ -0.86
C9orf3-205ENST00000427193 KIAA1324LA8MWY0 1029 aaPredicted RBP9.65□□□□□ -0.86
C9orf3-205ENST00000427193 BEND4Q6ZU67 534 aa9.65□□□□□ -0.86
C9orf3-205ENST00000427193 KCNF1Q9H3M0 494 aa9.65□□□□□ -0.86
C9orf3-205ENST00000427193 LATS2Q9NRM7 1088 aa9.65□□□□□ -0.86
C9orf3-205ENST00000427193 GAS2O43903 313 aaKnown RBP9.64□□□□□ -0.87
C9orf3-205ENST00000427193 ICMTO60725 284 aa9.64□□□□□ -0.87
C9orf3-205ENST00000427193 ESRRAP11474 423 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-205ENST00000427193 GRIK1P39086 918 aa9.64□□□□□ -0.87
C9orf3-205ENST00000427193 NUTM2GQ5VZR2 741 aa9.64□□□□□ -0.87
C9orf3-205ENST00000427193 INTS5Q6P9B9 1019 aaKnown RBP9.64□□□□□ -0.87
C9orf3-205ENST00000427193 TMPRSS13Q9BYE2 586 aa9.64□□□□□ -0.87
C9orf3-205ENST00000427193 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
C9orf3-205ENST00000427193 LOC100289279A0A1B0GTE1 492 aa9.63□□□□□ -0.87
C9orf3-205ENST00000427193 SMG8Q8ND04 991 aaKnown RBP9.63□□□□□ -0.87
C9orf3-205ENST00000427193 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
C9orf3-205ENST00000427193 SUGCTQ9HAC7 445 aa9.63□□□□□ -0.87
C9orf3-205ENST00000427193 CYP4F12Q9HCS2 524 aa9.63□□□□□ -0.87
C9orf3-205ENST00000427193 MED26O95402 600 aa9.62□□□□□ -0.87
C9orf3-205ENST00000427193 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
C9orf3-205ENST00000427193 GALNT12Q8IXK2 581 aa9.61□□□□□ -0.87
C9orf3-205ENST00000427193 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
C9orf3-205ENST00000427193 PRR19A6NJB7 356 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 H3BRB1 525 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 TIAF1O95411 115 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 NEFLP07196 543 aa9.6□□□□□ -0.87
C9orf3-205ENST00000427193 MAP4P27816 1152 aaKnown RBP9.6□□□□□ -0.87
C9orf3-205ENST00000427193 EXOSC6Q5RKV6 272 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms