RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SPDYE3A6NKU9 549 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 PCK1P35558 622 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 FLIIQ13045 1269 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 UBXN1Q04323 297 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 CETN3O15182 167 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 IFT20Q8IY31 132 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 CACYBPQ9HB71 228 aaKnown RBP16.24■□□□□ 0.19
PTPN13-203ENST00000427191 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 ZEB2O60315 1214 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
PTPN13-203ENST00000427191 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 SPATS2Q86XZ4 545 aaKnown RBP16.24■□□□□ 0.19
PTPN13-203ENST00000427191 LGSNQ5TDP6 509 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 HVCN1Q96D96 273 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
PTPN13-203ENST00000427191 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
PTPN13-203ENST00000427191 RNF168Q8IYW5 571 aaPredicted RBP16.23■□□□□ 0.19
PTPN13-203ENST00000427191 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 TTF2Q9UNY4 1162 aaKnown RBP16.23■□□□□ 0.19
PTPN13-203ENST00000427191 MTMR3Q13615 1198 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 NBPF4Q96M43 638 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 GLT8D2Q9H1C3 349 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 KRT2P35908 639 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 KRT79Q5XKE5 535 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 KCNK9Q9NPC2 374 aa16.23■□□□□ 0.19
PTPN13-203ENST00000427191 SMAP1Q8IYB5 467 aaPredicted RBP16.23■□□□□ 0.19
PTPN13-203ENST00000427191 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
PTPN13-203ENST00000427191 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
PTPN13-203ENST00000427191 ST5P78524 1137 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 I3L4J1 428 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 BUB1BO60566 1050 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-203ENST00000427191 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 HAUS8Q9BT25 410 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 MCUR1Q96AQ8 359 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 SPTLC2O15270 562 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 TERF1P54274 439 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 CHMP4BP1P59074 171 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 SATB1Q01826 763 aa16.22■□□□□ 0.19
PTPN13-203ENST00000427191 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
PTPN13-203ENST00000427191 MGEA5O60502 916 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 TYRO3Q06418 890 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 UBLCP1Q8WVY7 318 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-203ENST00000427191 NUCB1Q02818 461 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 TFIP11Q9UBB9 837 aaKnown RBP16.21■□□□□ 0.19
PTPN13-203ENST00000427191 AOPEPQ8N6M6 819 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
PTPN13-203ENST00000427191 SMARCA5O60264 1052 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-203ENST00000427191 SDCCAG8Q86SQ7 713 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-203ENST00000427191 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 F13A1P00488 732 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 GABPB1Q06547 395 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-203ENST00000427191 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 CCDC38Q502W7 563 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 NUP58Q9BVL2 599 aa16.21■□□□□ 0.19
PTPN13-203ENST00000427191 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.18
PTPN13-203ENST00000427191 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 KLF18A0A0U1RQI7 1052 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 TRIM27P14373 513 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 TMX3Q96JJ7 454 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 ITIH3Q06033 890 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 GIMAP6Q6P9H5 292 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 NCOA1Q15788 1441 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 GKAP1Q5VSY0 366 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-203ENST00000427191 RPGRIP1Q96KN7 1286 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 ELP1O95163 1332 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 EPB41P11171 864 aaKnown RBP16.2■□□□□ 0.18
PTPN13-203ENST00000427191 ZBTB17Q13105 803 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 PPP2R5EQ16537 467 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 AKR1B15C9JRZ8 316 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-203ENST00000427191 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 PFDN4Q9NQP4 134 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 PARP2Q9UGN5 583 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 STX10O60499 249 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 AFMP43652 599 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 CERS3Q8IU89 383 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 SYCE1Q8N0S2 351 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC8Q9H0W5 538 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-203ENST00000427191 NAPAP54920 295 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 GEN1Q17RS7 908 aa16.2■□□□□ 0.18
PTPN13-203ENST00000427191 E7EVH7 732 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC186Q7Z3E2 898 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC65Q8IXS2 484 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 GUCA1BQ9UMX6 200 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 WDR44Q5JSH3 913 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 IMPACTQ9P2X3 320 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 SCAF11Q99590 1463 aaKnown RBP16.19■□□□□ 0.18
PTPN13-203ENST00000427191 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 INPP5BP32019 993 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms