RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 XPO4Q9C0E2 1151 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 CARMIL3Q8ND23 1372 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 EYA2O00167 538 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 SLC3A2P08195 630 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 ATL3Q6DD88 541 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 KIAA1468Q9P260 1216 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 RGPD2P0DJD1 1756 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 NBPF26B4DH59 902 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 H7C1W4 665 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 SPTLC2O15270 562 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 PRC1O43663 620 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 TTC39AQ5SRH9 613 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 NBPF10Q6P3W6 841 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 LINC00301Q8NCQ3 95 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 RTEL1Q9NZ71 1219 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 MARF1Q9Y4F3 1742 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 KDM6AO15550 1401 aaPredicted RBP8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 LMOD1P29536 600 aaPredicted RBP8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 ELF2Q15723 593 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 IMMTQ16891 758 aaKnown RBP8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 RALYLQ86SE5 291 aaKnown RBP8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 FGAP02671 866 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 ADORA1P30542 326 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 CCDC158Q5M9N0 1113 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 AGXT2Q9BYV1 514 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 ZNF202O95125 648 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 RXRAP19793 462 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 GSDMDP57764 484 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 NYAP1Q6ZVC0 841 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 HOMER1Q86YM7 354 aa8.75□□□□□ -1.01
SMARCC1-202ENST00000425518 OVOS2A0A0G2JMS6 1433 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 SFPQP23246 707 aaKnown RBP eCLIP8.74□□□□□ -1.014e-6■□□□□ 11
SMARCC1-202ENST00000425518 TPM4P67936 248 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 GNL2Q13823 731 aaKnown RBP8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 SYCP1Q15431 976 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 PTPN21Q16825 1174 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 SYT10Q6XYQ8 523 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 NBPF11Q86T75 865 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 FBXO18Q8NFZ0 1043 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 KCNG4Q8TDN1 519 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 RFX7Q2KHR2 1363 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 DHX16O60231 1041 aaKnown RBP8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 APPP05067 770 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 CCDC57Q2TAC2 916 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 KMT5BQ4FZB7 885 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 PI16Q6UXB8 463 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 CHMP4CQ96CF2 233 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 SLU7O95391 586 aaKnown RBP8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 AIFM3Q96NN9 605 aa8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 DDX41Q9UJV9 622 aaKnown RBP8.74□□□□□ -1.01
SMARCC1-202ENST00000425518 A0A1W2PQ27 194 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 A0A1W2PQ64 194 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 A0A1W2PQD8 194 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 KIF28PB7ZC32 967 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ZNF213O14771 459 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 NRDCO43847 1150 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 XAGE2Q96GT9 111 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 PUS7LQ9H0K6 701 aaKnown RBP8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ZAP70P43403 619 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 SCARF1Q14162 830 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 E4F1Q66K89 784 aaPredicted RBP8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ARMCX5Q6P1M9 558 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ATP1A3P13637 1013 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 PFKFB1P16118 471 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 NCOA7Q8NI08 942 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 ERO1AQ96HE7 468 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 GPR108Q9NPR9 543 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 DENND2AQ9ULE3 1009 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 LMO7Q8WWI1 1683 aa8.73□□□□□ -1.01
SMARCC1-202ENST00000425518 SERPINC1P01008 464 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 NLRP12P59046 1061 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 TRDNQ13061 729 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 ERCC6LQ2NKX8 1250 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 LRRFIP1Q32MZ4 808 aaKnown RBP8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 HSP90AA4PQ58FG1 418 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 PPP1R13BQ96KQ4 1090 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 WDHD1O75717 1129 aaPredicted RBP8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 YEATS4O95619 227 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 SYKP43405 635 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 FANCCQ00597 558 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 STK11IPQ8N1F8 1099 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 FAM89AQ96GI7 184 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 OSBPL5Q9H0X9 879 aaPredicted RBP8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.016e-8■■■□□ 19.2
SMARCC1-202ENST00000425518 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 GOLGA8FQ08AF8 430 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 GOLGA8DPQ0D2H9 430 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 FAM177A1Q8N128 213 aaPredicted RBP8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 CCDC150Q8NCX0 1101 aa8.72□□□□□ -1.01
SMARCC1-202ENST00000425518 PHKBQ93100 1093 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms