RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 MTMR14Q8NCE2 650 aa15.56■□□□□ 0.08
HLA-DQB3-203ENST00000425319 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
HLA-DQB3-203ENST00000425319 CNNM1Q9NRU3 951 aa15.56■□□□□ 0.08
HLA-DQB3-203ENST00000425319 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 PLIN1O60240 522 aa15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 TNNI2P48788 182 aa15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 C15orf52Q6ZUT6 534 aaKnown RBP15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 IFNL1Q8IU54 200 aa15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 ANKRD13AQ8IZ07 590 aa15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 C9orf78Q9NZ63 289 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 TRIM17Q9Y577 477 aa15.55■□□□□ 0.08
HLA-DQB3-203ENST00000425319 COL1A1P02452 1464 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB3-203ENST00000425319 WTIPA6NIX2 430 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB3-203ENST00000425319 MAP3K11Q16584 847 aa15.54■□□□□ 0.08
HLA-DQB3-203ENST00000425319 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
HLA-DQB3-203ENST00000425319 G2E3Q7L622 706 aa15.54■□□□□ 0.08
HLA-DQB3-203ENST00000425319 AKAP11Q9UKA4 1901 aa15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 TAF5LO75529 589 aa15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 IL1R1P14778 569 aa15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 VPS37DQ86XT2 251 aa15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 HELBQ8NG08 1087 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 TMEM106CQ9BVX2 250 aa15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 POLR2AP24928 1970 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB3-203ENST00000425319 NBPF11Q86T75 865 aa15.52■□□□□ 0.08
HLA-DQB3-203ENST00000425319 HOOK2Q96ED9 719 aa15.52■□□□□ 0.08
HLA-DQB3-203ENST00000425319 ZBED3Q96IU2 234 aaPredicted RBP15.52■□□□□ 0.08
HLA-DQB3-203ENST00000425319 WNK4Q96J92 1243 aa15.52■□□□□ 0.08
HLA-DQB3-203ENST00000425319 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
HLA-DQB3-203ENST00000425319 HIBADHP31937 336 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB3-203ENST00000425319 LMBR1LQ6UX01 489 aa15.51■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SP3Q02447 781 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 UBE4AQ14139 1066 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 RASA3Q14644 834 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 KIF22Q14807 665 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 PRMT6Q96LA8 375 aaPredicted RBP15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 EFCC1Q9HA90 598 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 ZFYVE28Q9HCC9 887 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 CSADQ9Y600 493 aa15.5■□□□□ 0.07
HLA-DQB3-203ENST00000425319 VAMP4O75379 141 aa15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 KLRK1P26718 216 aa15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 CASP7P55210 303 aa15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 TMOD2Q9NZR1 351 aa15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SERPINA10Q9UK55 444 aa15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 TTF2Q9UNY4 1162 aaKnown RBP15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SALL2Q9Y467 1007 aaPredicted RBP15.49■□□□□ 0.07
HLA-DQB3-203ENST00000425319 GRM8O00222 908 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 ANP32CO43423 234 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 USP2O75604 605 aaPredicted RBP15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 ALDH1L1O75891 902 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 GTF2A2P52657 109 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 MFSD14BQ5SR56 506 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 NBPF12Q5TAG4 269 aaPredicted RBP15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SLC4A10Q6U841 1118 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 OTOP1Q7RTM1 612 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SRCIN1Q9C0H9 1055 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 MRS2Q9HD23 443 aa15.48■□□□□ 0.07
HLA-DQB3-203ENST00000425319 SCN9AQ15858 1988 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 FOXO4P98177 505 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 BEND3Q5T5X7 828 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 CERS5Q8N5B7 392 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 TBC1D22AQ8WUA7 517 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 ZNF70Q9UC06 446 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 PTPN22Q9Y2R2 807 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 COL4A1P02462 1669 aa15.47■□□□□ 0.07
HLA-DQB3-203ENST00000425319 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
HLA-DQB3-203ENST00000425319 FAM205AQ6ZU69 1335 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 FANCIQ9NVI1 1328 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 F6X3S4 739 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 TAF1CQ15572 869 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 TDRD7Q8NHU6 1098 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CD99L2Q8TCZ2 262 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 R3HDMLQ9H3Y0 253 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 TDRD3Q9H7E2 651 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 FZD1Q9UP38 647 aa15.45■□□□□ 0.06
HLA-DQB3-203ENST00000425319 TESPA1A2RU30 521 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 SNAP23O00161 211 aa15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 HDLBPQ00341 1268 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CRHR2Q13324 411 aa15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 SLC4A8Q2Y0W8 1093 aa15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 DZIP1LQ8IYY4 767 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 ZNF594Q96JF6 807 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 JAG2Q9Y219 1238 aa15.44■□□□□ 0.06
HLA-DQB3-203ENST00000425319 MAST3O60307 1309 aa15.43■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CETPP11597 493 aa15.43■□□□□ 0.06
HLA-DQB3-203ENST00000425319 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CRKP46108 304 aa15.43■□□□□ 0.06
HLA-DQB3-203ENST00000425319 GYG1P46976 350 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms