RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FBXO18Q8NFZ0 1043 aa17.7■□□□□ 0.42
C9orf3-204ENST00000424143 SDF4Q9BRK5 362 aa17.7■□□□□ 0.42
C9orf3-204ENST00000424143 NEDD4P46934 1319 aa17.7■□□□□ 0.42
C9orf3-204ENST00000424143 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
C9orf3-204ENST00000424143 USP27XA6NNY8 438 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 MYL6BP14649 208 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 ZRSR1Q15695 479 aaKnown RBP17.69■□□□□ 0.42
C9orf3-204ENST00000424143 SRRTQ9BXP5 876 aaKnown RBP17.69■□□□□ 0.42
C9orf3-204ENST00000424143 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 COL18A1P39060 1754 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 MAST3O60307 1309 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 EYA2O00167 538 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 SPTLC2O15270 562 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 H2AFXP16104 143 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-204ENST00000424143 ARID5BQ14865 1188 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 STK38Q15208 465 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 KMT5BQ4FZB7 885 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
C9orf3-204ENST00000424143 NUP188Q5SRE5 1749 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 GOLIM4O00461 696 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
C9orf3-204ENST00000424143 CEBPZQ03701 1054 aaKnown RBP17.68■□□□□ 0.42
C9orf3-204ENST00000424143 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 MYSM1Q5VVJ2 828 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 E4F1Q66K89 784 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-204ENST00000424143 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 TUBE1Q9UJT0 475 aa17.68■□□□□ 0.42
C9orf3-204ENST00000424143 ZHX1Q9UKY1 873 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-204ENST00000424143 PHLPP2Q6ZVD8 1323 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 TJP1Q07157 1748 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 ATP8B1O43520 1251 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 SFPQP23246 707 aaKnown RBP eCLIP17.67■□□□□ 0.42
C9orf3-204ENST00000424143 NDUFA8P51970 172 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 NCAPHQ15003 741 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 C8orf76Q96K31 380 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 PPP1R13BQ96KQ4 1090 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
C9orf3-204ENST00000424143 PPP6R2O75170 966 aa17.66■□□□□ 0.42
C9orf3-204ENST00000424143 CCT2P78371 535 aaKnown RBP17.66■□□□□ 0.42
C9orf3-204ENST00000424143 BMS1Q14692 1282 aaKnown RBP17.66■□□□□ 0.42
C9orf3-204ENST00000424143 SF3A1Q15459 793 aaKnown RBP17.66■□□□□ 0.42
C9orf3-204ENST00000424143 TERF2Q15554 542 aa17.66■□□□□ 0.42
C9orf3-204ENST00000424143 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-204ENST00000424143 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
C9orf3-204ENST00000424143 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
C9orf3-204ENST00000424143 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-204ENST00000424143 TPM1P09493 284 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 IFIT1P09914 478 aaKnown RBP17.65■□□□□ 0.42
C9orf3-204ENST00000424143 SLC39A14Q15043 492 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 IMMTQ16891 758 aaKnown RBP17.65■□□□□ 0.42
C9orf3-204ENST00000424143 ARMCX5Q6P1M9 558 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-204ENST00000424143 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 XPO4Q9C0E2 1151 aaKnown RBP17.65■□□□□ 0.42
C9orf3-204ENST00000424143 TMX1Q9H3N1 280 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 ZNF202O95125 648 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 ANO1Q5XXA6 986 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 SYNE3Q6ZMZ3 975 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 JMYQ8N9B5 988 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 HPSEQ9Y251 543 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
C9orf3-204ENST00000424143 ETF1P62495 437 aaKnown RBP17.64■□□□□ 0.41
C9orf3-204ENST00000424143 DPCR1Q3MIW9 517 aa17.64■□□□□ 0.41
C9orf3-204ENST00000424143 FBXO38Q6PIJ6 1188 aa17.64■□□□□ 0.41
C9orf3-204ENST00000424143 NOL10Q9BSC4 688 aaKnown RBP17.64■□□□□ 0.41
C9orf3-204ENST00000424143 NCOA5Q9HCD5 579 aaKnown RBP17.64■□□□□ 0.41
C9orf3-204ENST00000424143 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
C9orf3-204ENST00000424143 CPDO75976 1380 aa17.64■□□□□ 0.41
C9orf3-204ENST00000424143 MEGF6O75095 1541 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 ADAMTSL3P82987 1691 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 A0A1B0GVL5 298 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 NAA30Q147X3 362 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-204ENST00000424143 IFNKQ9P0W0 207 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 ORC3Q9UBD5 711 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-204ENST00000424143 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.63■□□□□ 0.41
C9orf3-204ENST00000424143 CLIC4Q9Y696 253 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 C4AP0C0L4 1744 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
C9orf3-204ENST00000424143 GOLGA6L9A6NEM1 432 aa17.62■□□□□ 0.41
C9orf3-204ENST00000424143 FANCCQ00597 558 aa17.62■□□□□ 0.41
C9orf3-204ENST00000424143 KIF23Q02241 960 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-204ENST00000424143 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
C9orf3-204ENST00000424143 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
C9orf3-204ENST00000424143 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
C9orf3-204ENST00000424143 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.62■□□□□ 0.41
C9orf3-204ENST00000424143 CCDC66A2RUB6 948 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 M0R2C6 588 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 CDKL5O76039 1030 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 CHGBP05060 677 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 ZNF771Q7L3S4 317 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-204ENST00000424143 APPBP2Q92624 585 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 ZNF512BQ96KM6 892 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms